Pairwise Alignments

Query, 318 a.a., putative D-ribose-binding periplasmic protein from Phaeobacter inhibens DSM 17395

Subject, 327 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  115 bits (287), Expect = 2e-30
 Identities = 81/253 (32%), Positives = 130/253 (51%), Gaps = 22/253 (8%)

Query: 4   RRMLATTTATAAMAVAG---------MAAAETMTIGITQNNVGVDSYQTTYEKAFIAAAE 54
           R  +   TA  A+A+AG         +A  ET  +G  Q     + ++     +  A AE
Sbjct: 7   RAFMLAATAAGAIAIAGTVAFAELPKLAQKETYKVGFAQTESN-NPWRIAQTNSMKAEAE 65

Query: 55  ANADVEVVVLDAGGDVARQIAQMEDLIQQEVDAIIIWPTNGEAVIPAVRKAHQADIPVVV 114
                ++V  DA G  A+Q+A +  +I Q VD I + P   + +IPAV  A +A IPV++
Sbjct: 66  KLGH-QLVYTDAAGSAAKQVADVNSMIAQGVDLIFLAPREEKPLIPAVMAAKKAGIPVIL 124

Query: 115 ----TNSNIAEAGFPFVATFSGPDNITQGARSAEIMCDRFKSLGTENEAKVVHITGQPGY 170
                + ++A+AG  +V TF G D I +G R AE +           ++K++ + G  G 
Sbjct: 125 LDRSVDPSLAKAGEDYV-TFIGSDFIEEGKRIAEWLVK-----NANGKSKIIELEGTTGS 178

Query: 171 TTAIERAKGFNDRLPEVCPNVEQIDEQPGDWNREKSQQVMEAFLVKYDDIDGVYSGDDNM 230
           + A +R KGF++ + +     E +  Q GD+ R+K +QV EA L  + D D VY+ +D M
Sbjct: 179 SPANDRKKGFDETI-KAAGGFEIVASQSGDFARDKGRQVAEALLQAHPDADIVYAHNDEM 237

Query: 231 GVGAMNAAVAAGR 243
            +GA+ A  AAG+
Sbjct: 238 AIGAIAAIEAAGK 250