Pairwise Alignments

Query, 318 a.a., putative D-ribose-binding periplasmic protein from Phaeobacter inhibens DSM 17395

Subject, 318 a.a., ABC transporter substrate-binding protein from Pantoea sp. MT58

 Score = 89.7 bits (221), Expect = 8e-23
 Identities = 79/277 (28%), Positives = 130/277 (46%), Gaps = 15/277 (5%)

Query: 4   RRMLATTTATAAMAVAGMAAAETMTIGITQNNVGVDSYQTTYEKAFIAAAEANADVEVVV 63
           +R+L TT  +AA+   G   A  MT+G +Q  VG +S   + E     +      + + +
Sbjct: 3   KRLLLTTLVSAALT--GPVLAADMTVGFSQ--VGSESGWRSAETNVAKSEAKKRGITLKI 58

Query: 64  LDAGGDVARQIAQMEDLIQQEVDAIIIWPTNGEAVIPAVRKAHQADIPVVVTNSNIAEAG 123
            D       QI  +   I Q VDAI I P       P + +A  A IPV + +  I    
Sbjct: 59  ADGQQKQENQIKAVRSFIAQGVDAIFIAPVVQTGWEPVLEEAKDAKIPVYLLDRAIVVKD 118

Query: 124 FPFVATFSGPDNITQGARSAEIMCDRFKSLGTENEAKVVHITGQPGYTTAIERAKGFNDR 183
                     DN+ +G    + +    K++G + +  VV + G  G + AI+R KGF + 
Sbjct: 119 KSLYQAVVTADNVLEGKLIGDWLV---KTVG-DKKCNVVELQGTVGASVAIDRKKGFAEA 174

Query: 184 LPEVCPNVEQIDEQPGDWNREKSQQVMEAFLVKYD---DIDGVYSGDDNMGVGAMNAAVA 240
           +    PN++ I  Q GD+ R K ++VME+F+   +   +I  VY+ +D+M +GA+ A   
Sbjct: 175 ISNH-PNIKVIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMAIGAIQAIKE 233

Query: 241 AG-REGITFVGATNFAVG--YEAMAAGTYWGSIYQSP 274
           AG + G   +  +   V   Y+AM AG    ++  +P
Sbjct: 234 AGLKPGKDILTGSIDGVPDIYKAMLAGEANANVELTP 270