Pairwise Alignments

Query, 332 a.a., putative type IV secretion system protein VirB6 from Phaeobacter inhibens DSM 17395

Subject, 380 a.a., Inner membrane protein of type IV secretion of T-DNA complex, VirB6 from Xanthomonas campestris pv. campestris strain 8004

 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 33/150 (22%)

Query: 159 GLVLIFAKIMLAFMIGIAPIMIALSLFDVSKDYFHRWL----SSTVSYALYPLVIAGVFS 214
           G +L+  K  +AF+IGI PI I   +FD +KD F +WL     +  S A+  +V A V  
Sbjct: 184 GAMLLLFKFTMAFLIGIGPIFILALIFDQTKDLFKKWLFYVIGTLFSMAMLSVVTAMVLK 243

Query: 215 TVVGMSRSL----MTELGDPSGASN-------IGALVPFFMMMFLAGGMIIATPLIVRSI 263
               ++ +     +  LG+  G S+       IG ++           +II+ P +  +I
Sbjct: 244 FTAKVAAAYWAAQLITLGNAEGLSSQALQQGGIGLVMTL---------LIISVPTLAAAI 294

Query: 264 ----SGNFMM-----AGPPSMPGPGGFAKG 284
                G FM       G  + PGP G   G
Sbjct: 295 WQGNMGTFMAYSAFDRGGAASPGPQGQPAG 324