Pairwise Alignments

Query, 332 a.a., putative type IV secretion system protein VirB6 from Phaeobacter inhibens DSM 17395

Subject, 358 a.a., TrbL/VirB6 plasmid conjugal transfer protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  338 bits (866), Expect = 2e-97
 Identities = 168/319 (52%), Positives = 233/319 (73%), Gaps = 6/319 (1%)

Query: 1   MGVVTWMVETTDNFLDDAAQTTFGNVAGQLGGVIAVASTLAVIGIFLNMVFQYKSMDGRT 60
           M VVT+ VET+  +LD AA+T FG VA  +G ++ + +TL VI + +NM++QY++MDG T
Sbjct: 1   MSVVTYFVETSQAYLDTAAETQFGAVAETVGTLLVLGTTLVVILVGINMIYQYRAMDGHT 60

Query: 61  AFWFALKLMLISLFAINWVQFNAVASALINGLDQLAGGMVAGLGGGGAGAS-YFAEAFDD 119
           AFW A+K+ LI +FA NW+QFNA +SA++ G+D +AG +VA +GGG  G S  FAE FD 
Sbjct: 61  AFWLAVKIGLIGIFATNWMQFNAFSSAILYGIDSIAGALVASVGGGSPGPSGTFAEEFDR 120

Query: 120 LIEEFGDYLNAAGDNMHWMAGALIGAIGAFLLGVIGALCGLVLIFAKIMLAFMIGIAPIM 179
           LI E GDYLNAAG  ++WMAGA++  +G  LL ++G L   +L+ +++M+A +IGIAP+M
Sbjct: 121 LIAELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVM 180

Query: 180 IALSLFDVSKDYFHRWLSSTVSYALYPLVIAGVFSTVVGMSRSLMTELGDPSGASNIGAL 239
           I L+LF+V+KDYF RWLS+ +S+A+YP+V+AGVF+TV G++ +L+ ELG+P GASNIGAL
Sbjct: 181 IFLTLFEVTKDYFARWLSALISFAIYPIVVAGVFATVTGVASALIGELGNPEGASNIGAL 240

Query: 240 VPFFMMMFLAGGMIIATPLIVRSISGNFMMAGPPSMPGPGG---FAKGLMGTKGSRARAR 296
           +PFFMM+ +A G IIATP IVR+ISGN MM  P    G GG   FA+  MG++ +  R  
Sbjct: 241 IPFFMMVLMAKGFIIATPFIVRAISGNIMM--PALSGGLGGGYNFARAAMGSQQAYNRYL 298

Query: 297 FGTRSNAEIAGVGIRQAGG 315
            G  S AE A +  RQ  G
Sbjct: 299 IGGASGAEYAAIRARQFFG 317