Pairwise Alignments

Query, 534 a.a., medium-chain-fatty-acid--CoA ligase AlkK from Phaeobacter inhibens DSM 17395

Subject, 541 a.a., AMP-dependent synthetase and ligase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  200 bits (508), Expect = 1e-55
 Identities = 157/532 (29%), Positives = 240/532 (45%), Gaps = 45/532 (8%)

Query: 14  PLLIKHLLTRSNIASASQEIVSGTEMRLNYAALGKRVRQLANSLKASGIREGMRVGVMDW 73
           PL     L R+ +    +E V     R  YA    RV +LA++L  +GI  G  V  +  
Sbjct: 19  PLTPLSHLARAALVYPDREAVVYGARRFTYAEYHARVSRLASALAGAGIAPGDVVATLLP 78

Query: 74  DTHRYLECFFAIPMMGASLFTINVRLSPAQVLYTINHGQPDLIIVHRDFMPLIEGIKSGF 133
           +    +E  F +P  GA L TIN+RL    V Y ++HG    ++V   F+PL        
Sbjct: 79  NIPAMVEAHFGVPACGAVLNTINIRLDVDTVAYILSHGGAKAVLVDSQFLPLAAEACERL 138

Query: 134 DRDITIV-----------PIGDGEGYEEWIGKAPGSFDFPDF---DENQTATLFYTTGTT 179
           D    ++            +G    YE+++  A G  DFP     DE ++  L YT+GTT
Sbjct: 139 DGPAPLLIEVADDAAGVHALGGYTEYEDFL--AGGDPDFPWIMPRDEWESLALNYTSGTT 196

Query: 180 GNPKGVSYSHRQLILHTLGLIAGFGA--WPGNAGFHRGDVYMPLTPLFHVHGWGFPYAAT 237
           G PKGV Y HR   L T+G +  +    +P          ++ + PLFH +GW   +   
Sbjct: 197 GRPKGVVYHHRGAYLMTMGTVISWRMVLYPR---------WLAIVPLFHCNGWNHSWMMP 247

Query: 238 MLGLRQVYPGRYDPDTILRLIADENVTFSHCVPTVLSMVLDHPGCPQIDLDRWKVIIGGA 297
           MLG   V         I   IA+  VT     P VL+M+++ P   +        +    
Sbjct: 248 MLGGTVVCCRDVSAQAIYTAIAENGVTHFGGAPIVLNMIVNAPDAARRPFSHTVEVFTAG 307

Query: 298 ALPRNLQDRAAAA-GISLHAAYGMSETCPFLTVADLS--------SNDPEMQAQTGFPGP 348
           A P      A    G ++   YG++ET   +T    +        +    ++A+ G   P
Sbjct: 308 APPAAATLAAIEELGFNVTQVYGLTETYGHVTECVWNPDWDTLPQAERAAIKARQGVALP 367

Query: 349 LVD-LRVVTPDMQDVPHDGETTGEVVARAPWLTQGYLDNAQASDELWDGGYLHTGDVGYI 407
            ++ + V+ P+M+ VP DG TTGEV+ R   + +GY  N  A+ E + GGY H+GD+   
Sbjct: 368 QMEHITVMDPEMRQVPMDGATTGEVMMRGNSVMKGYYRNPDATAEAFAGGYFHSGDIALQ 427

Query: 408 RENGSLQITDRLKDVIKTGGEWISSLALENIASSCSGVEDVAAIGLPHAKWGERPVLVAQ 467
             +G +QI DR KD+I +GGE ISS+ +E        V   A +  P   WGE P    +
Sbjct: 428 HPDGYIQIADRAKDIIISGGENISSVEVEGALMHHPAVLLCAVVAKPDPTWGEVPCAFVE 487

Query: 468 AAKDADPDLVRLRVIEAIQSRVGAGEISKWAVPDEIVFVDRLPKTSVGKLDK 519
                  +     +I   + R     ++ +  P ++VF + LPKTS GK+ K
Sbjct: 488 LKDGKTAE--EAEIIAFARER-----LAGFKTPKKVVFTE-LPKTSTGKIQK 531