Pairwise Alignments

Query, 237 a.a., putative N-acetylmuramoyl-L-alanine amidase AmiD from Phaeobacter inhibens DSM 17395

Subject, 263 a.a., amidase (AMPD protein) from Sinorhizobium meliloti 1021

 Score =  134 bits (336), Expect = 2e-36
 Identities = 70/153 (45%), Positives = 93/153 (60%), Gaps = 6/153 (3%)

Query: 18  PSPNFNARRNDLRPHLIVLHYTAMDSAEAALERLCDPQYEVSAHYLIGADGTLWQMVREA 77
           PSPN   R    RP +I+LHYT M++A +AL+ LC  + +VS HY +  +G + Q+V E 
Sbjct: 15  PSPNHGERAGGRRPDMIILHYTGMETAASALDWLCREESQVSCHYFVDEEGRIAQLVPEE 74

Query: 78  DRAWHAGAGEWCGQEDINSRSIGIELDNRGDHPFSAPQM--TRLETLLSAIL---QRWAI 132
            RAWHAG G W G+ DINS SIGIE+ N G HP   P     ++E +    L   +RW I
Sbjct: 75  RRAWHAGKGVWKGETDINSCSIGIEIANAG-HPGGLPDFPEAQIEAVAELCLDCGERWQI 133

Query: 133 SPTGVIGHSCMAPGRKSDPGPRFDWARLARQGL 165
           +P  V+ HS +AP RK DPG  F W  L R+G+
Sbjct: 134 TPERVLAHSDIAPIRKVDPGENFPWDVLFRRGV 166