Pairwise Alignments

Query, 464 a.a., multidrug resistance protein NorM from Phaeobacter inhibens DSM 17395

Subject, 468 a.a., Multi antimicrobial extrusion protein MatE (NCBI) from Rhodospirillum rubrum S1H

 Score =  302 bits (774), Expect = 1e-86
 Identities = 178/447 (39%), Positives = 253/447 (56%), Gaps = 11/447 (2%)

Query: 23  LGLPLIGGHVAQFAIGLTDTVMLGWYGVEALAAVTLGSTYFFTIFLLGSGFAFAVMPMVA 82
           L  PLI  ++AQ A+  TD +++G  G  +LAA  + +  F  + L G G   A +P++A
Sbjct: 26  LAWPLILTNLAQAALTTTDLLLIGSLGSRSLAAAAMAAGLFQALMLFGLGLVSATLPLLA 85

Query: 83  AAAGAGEE--RQIRRSTRMALWLSLAYGLLVMPL---LWWSEPILLLLGQEAEVAHGAAE 137
            A G      R +RR+ R  LW +   GL+ +PL   LW +E +L+  GQE  +A  AA 
Sbjct: 86  TALGRNRHSVRDVRRTVRQGLWSA---GLISLPLWLILWHTEAVLIAFGQEPALAAEAAG 142

Query: 138 YLRIAGWALFPALLYMVLKSYLAALERTQIVLLVSVLAAALNALINYALIFGNWGAPELG 197
           ++    W L P L Y+VL+++L+ALER    LLV+ LA   NAL  +ALIFG+ G P LG
Sbjct: 143 FMHTLQWGLLPFLGYIVLRAFLSALERPMWPLLVAGLAIGFNALAAWALIFGHLGLPALG 202

Query: 198 VTGAALASLATNVF--ACIFVLFYALKALPEHELLKNFQRPDWEMLSRVLRLGLPIGLTN 255
           + GA ++S  +++F  A + ++    + L  + L   F RPDW  L  + RLGLP+ ++ 
Sbjct: 203 LPGAGVSSSLSSLFMVAGLALVITRQRRLKRYRLFGRFWRPDWPRLVTLWRLGLPMAISF 262

Query: 256 LSETSLFAASAMMMGWLGTVALGAHGIALSLGGLAFMMHLGLSNAATIRAGNAFGRGDRD 315
             E S+F AS MMMG LG  AL AH IAL +  L FM+ LGL  AAT+R G A G G   
Sbjct: 263 AFEVSIFQASMMMMGILGADALAAHTIALQIATLTFMVPLGLGQAATVRVGRALGAGTIP 322

Query: 316 HMARGARVVMAMSLGLSVLGMILFLAVPEALISLFLSPDDPDRAEIVLIGSVLLAAAALF 375
            + R   V     +       ++ L+VP  LI  FL  D  + A ++ +  VL+A AALF
Sbjct: 323 ALRRAGWVAYGAGVAFMGGAALMMLSVPRLLIGAFLDADLAENAPVIDLAVVLMALAALF 382

Query: 376 QLMDGMQVIALGLLRGVQDTGVPMVIAALSYWAVGIPASYLLGFTFEMGGLGVWLGLVLG 435
           Q+ DG Q +  G+LRG+ DT VPM++AAL YW +G+P   LL F   +G  GVW+GL  G
Sbjct: 383 QIADGAQAVCNGMLRGLHDTKVPMLLAALGYWGLGLPLGALLAFPLGVGAPGVWIGLAGG 442

Query: 436 LTAAGVFLMIRFWRRSIKLVGTSKTAA 462
           L+   V LM R W R +  +  +   A
Sbjct: 443 LSVVAV-LMTRRWIRLVAALERASVTA 468



 Score = 43.9 bits (102), Expect = 1e-08
 Identities = 63/235 (26%), Positives = 96/235 (40%), Gaps = 38/235 (16%)

Query: 241 LSRVLRLGLPIGLTNLSETSLFAASAMMMGWLGTVALGAHGIALSLGGLAFMMHLGLSNA 300
           L   L L  P+ LTNL++ +L     +++G LG+ +L A  +A  L     +  LGL +A
Sbjct: 20  LGATLSLAWPLILTNLAQAALTTTDLLLIGSLGSRSLAAAAMAAGLFQALMLFGLGLVSA 79

Query: 301 ATIRAGNAFGRGDRDHMARGARVVMAMSL---GLSVLGMILFLAVPEALISLFLSPDDPD 357
                  A GR    H  R  R  +   L   GL  L + L L   EA++  F    +P 
Sbjct: 80  TLPLLATALGR--NRHSVRDVRRTVRQGLWSAGLISLPLWLILWHTEAVLIAF--GQEPA 135

Query: 358 RAEIVLIGSVLLAAAALFQLMDGM-----QVIALGLLRGVQDTGVPMVIA-------ALS 405
            A          AA  +  L  G+      ++    L  ++    P+++A       AL+
Sbjct: 136 LA--------AEAAGFMHTLQWGLLPFLGYIVLRAFLSALERPMWPLLVAGLAIGFNALA 187

Query: 406 YWA-----VGIPASYL--LGFTFEMGGLGVWLGLVLGLTAAGVF----LMIRFWR 449
            WA     +G+PA  L   G +  +  L +  GL L +T         L  RFWR
Sbjct: 188 AWALIFGHLGLPALGLPGAGVSSSLSSLFMVAGLALVITRQRRLKRYRLFGRFWR 242