Pairwise Alignments

Query, 464 a.a., multidrug resistance protein NorM from Phaeobacter inhibens DSM 17395

Subject, 447 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

 Score = 91.7 bits (226), Expect = 5e-23
 Identities = 92/437 (21%), Positives = 186/437 (42%), Gaps = 34/437 (7%)

Query: 18  RAIAVLGLPLIGGHVAQFAIGLTDTVMLG-WYGVEALAAVTLGSTYFFTIFLLGSGFAFA 76
           + +  L +P I G +      + D   +G W G  A   + L   +   I   G  F   
Sbjct: 15  KLLVKLSVPAIIGMLIMALYNIVDGFFIGRWVGTAAFTGIALIFPFQMMIMAFGVTFGIG 74

Query: 77  VMPMVAAAAGAGEERQIRRSTRMALWLSLAYGLLVMPL-LWWSEPILLLLGQEAEVAHGA 135
              +++   G G     R++   A+   L   +L+  + + +  PIL LLG  A++   A
Sbjct: 75  GSSLLSRKLGEGNLDFARKAGGNAISSVLILSVLITIVGVVFMVPILNLLGTSADIFPYA 134

Query: 136 AEYLRIAGWALFPALLYMVLKSYLAALERTQIVLLVSVLAAALNALINYALIFGNWGAPE 195
            +Y  I  +        +   + + A    ++ +   V+ A +N +++  LI        
Sbjct: 135 KDYYEIILYGTIFNSYLVAANNLVRAEGMAKVAMFAMVVPAIINIILDPILII----VFN 190

Query: 196 LGVTGAALASLATNVFACIFVLFYALKALPEHELLKN----FQRPDWEMLSRVLRLGLPI 251
           +G+ GAA+A++ + +   I++L        +H+  KN    +   D+ +  ++L+  + I
Sbjct: 191 MGIKGAAIATVLSQIIGVIYIL--------KHQFGKNTSIKYAMNDFLINLKILKETVFI 242

Query: 252 GLTN-----LSETSLFAASAMMMGWLGTVALGAHGIALSLGGLAFMMHLGLSNAATIRAG 306
           G +      +S   L   + ++  + G +A+  +G+ + +  L  M  LG+        G
Sbjct: 243 GASEFAKLIISSILLILGNNLLGIYGGDIAIAIYGVIMRIAMLLLMPVLGIVQGFQPIVG 302

Query: 307 NAFGRGDRDHMARGARVVMAMSLGLSVLGMILFLAVPEALISLFLSPDDPDRAEIVLIGS 366
             +G+G  + ++   ++ +  + GL +LG IL +  PE  I +F++  DP   E++  G 
Sbjct: 303 YNYGKGQLNRVSESIKLALVGTSGLCLLGFILVMIFPEKFIQIFIT--DP---EVISQGV 357

Query: 367 VLLAAAALFQLMDGMQVIALGLLRGVQDTGVPMVIAALSYWAVGIPASYLLGFTFEMGGL 426
                  +F  + G Q+   GL + +       +I+        +PA  +L   F +   
Sbjct: 358 FATRIFFMFSFLIGAQMTIGGLYQSLGKAKPAFIISCARQTLFLMPALIILPLFFGLN-- 415

Query: 427 GVW----LGLVLGLTAA 439
           G+W    +G +LG T A
Sbjct: 416 GIWFSFPIGDLLGFTLA 432