Pairwise Alignments

Query, 333 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, substrate-binding component (from data) from Phaeobacter inhibens DSM 17395

Subject, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  456 bits (1173), Expect = e-133
 Identities = 218/321 (67%), Positives = 265/321 (82%)

Query: 10  AVALTMSAGTAMAACDDGEIVVKFSHVTNTDKHPKGIAASLLEKRINEEMNGTMCLEVYP 69
           A  L +++  A A CD GEIV+KFSHVTNTDKHPKGIAASLLEKR+NEEMNG  C++V+P
Sbjct: 10  ASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQVFP 69

Query: 70  NSTLYNDNKVLEAMLQGDVQLAAPSLSKFEKFTKQFRLFDLPFMFKNIDAVDAFQGSENG 129
           NSTLY+D+KVLEA+L GDVQLAAPSLSKFEKFTK++R+FDLPF+F+++DAVD FQ S  G
Sbjct: 70  NSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQSSAKG 129

Query: 130 QAMLDSMQRRGLQGLSYWHNGMKQMSANKPLINPSDANGLKFRVQSSDVLVAQMEAIGGS 189
           + + ++M RRG++GL +WHNGMKQ+SANKP++ P+DA GLKFRVQ+SDVLVAQ E IG +
Sbjct: 130 EELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQASDVLVAQFEQIGAN 189

Query: 190 PQKMAFSEVYGALQQGVVDGQENTWSNIYGKKFFEVQDGVTETNHGALDYLVVTSVDWLD 249
           PQKM+F+E YG LQ  V+DGQENTWSNIYG+K+FEVQDG TETNHG LDYLVVTS  W D
Sbjct: 190 PQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLVVTSSKWWD 249

Query: 250 SLDPAVREQFLTILGEVTATRNSESTKVNAEARQSIIDAGGVVRELTPEQRAAWVEAMKP 309
            L   VR+QF  IL EVT  RN+ES KV    +Q II+AGGVVR LTPEQR  WV+A+KP
Sbjct: 250 GLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGGVVRTLTPEQRQQWVDALKP 309

Query: 310 VWEQFAGDVGQDMIDAAQAIN 330
           VW++F  D+G D+I+AA A N
Sbjct: 310 VWQKFEKDIGADLIEAALAAN 330