Pairwise Alignments

Query, 333 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, substrate-binding component (from data) from Phaeobacter inhibens DSM 17395

Subject, 338 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  147 bits (371), Expect = 4e-40
 Identities = 94/325 (28%), Positives = 161/325 (49%), Gaps = 5/325 (1%)

Query: 2   KFVTAAATAVALTMSAGTAMAACDDGEIVVKFSHVTNTDKHPKGIAASLLEKRINEEMNG 61
           K     A  +AL M+AG A+A   D    VKF+   N   HP+        + + E+  G
Sbjct: 7   KLTLGLAVPLAL-MTAGPALAEIRDQ--TVKFASANNKG-HPQVTGMEKFAELVKEKSGG 62

Query: 62  TMCLEVYPNSTLYNDNKVLEAMLQGDVQLAAPSLSKFEKFTKQFRLFDLPFMFKNIDAVD 121
            + ++++P  TL  D + + A+  G +++   +        K+F   DLPF+F + +  D
Sbjct: 63  KIEVKLFPGGTLGGDVQTVSALQGGVIEMTVLNAGILASNVKEFGAVDLPFLFDSGEEAD 122

Query: 122 AFQGSENGQAMLDSMQRRGLQGLSYWHNGMKQMSANK-PLINPSDANGLKFRVQSSDVLV 180
                  G ++++ +   GL G++YW  G + ++ N+ P+    D  GLK R   S + V
Sbjct: 123 KVMDGPFGTSLMERLPATGLVGVAYWELGFRNLTNNRHPVTKLEDIKGLKIRTIQSPIPV 182

Query: 181 AQMEAIGGSPQKMAFSEVYGALQQGVVDGQENTWSNIYGKKFFEVQDGVTETNHGALDYL 240
               A+G +   + ++E+Y AL+ G VDGQEN  +NI   KF+EVQ  +T T H     +
Sbjct: 183 ELFNALGANAVPLPYTELYTALETGTVDGQENPSANIINAKFYEVQKYMTLTRHQYNPQI 242

Query: 241 VVTSVDWLDSLDPAVREQFLTILGEVTATRNSESTKVNAEARQSIIDAGGVVRELTPEQR 300
           V+ S  + D L+   +        E    +   S + +A A + I   G  V EL+ E+ 
Sbjct: 243 VLVSKKFWDGLNDEEKTVLQQAAVEARDFQRKVSREQDAAALEEIRKTGMEVSELSAEET 302

Query: 301 AAWVEAMKPVWEQFAGDVGQDMIDA 325
               +A+KP+ E+F+ D+GQ+ ++A
Sbjct: 303 QKLRDAVKPMIEKFSADIGQETVEA 327