Pairwise Alignments

Query, 225 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, small permease component (from data) from Phaeobacter inhibens DSM 17395

Subject, 212 a.a., C4-dicarboxylate ABC transporter from Pseudomonas aeruginosa PA14

 Score = 74.3 bits (181), Expect = 2e-18
 Identities = 67/238 (28%), Positives = 99/238 (41%), Gaps = 68/238 (28%)

Query: 13  NTLEETLIALLLGLMTLITFANVVARFVFN---------------------------SNI 45
           N  EE  I  LL  MTL+TF  VV   VF                             ++
Sbjct: 9   NRFEEGAIVFLLAAMTLVTFLYVVMTNVFTLFYDLGDRLPALRAPLYSVGDAILGVAQDM 68

Query: 46  LWALELTVFLFAWLVLLGASYAVKVHAHLGVDAILNMVSPGARRVIGLISVGCCLVFSLL 105
            W+  LT  LF WL+ LG +Y V+   HLGVDA++ +     +R+IG+++  CCL ++ L
Sbjct: 69  SWSNALTKALFGWLIFLGIAYGVRTAGHLGVDALVRLAPRPLQRLIGILACLCCLGYAGL 128

Query: 106 LLKGAYDYWAVFADLPPTSGRWFPTGFDMKARSQSFYEVQDVPMVAIFGFLEDLINYGDS 165
            +  +YD              W  T                  +VA  G  EDL ++G  
Sbjct: 129 FMVASYD--------------WVKT-----------------LLVAGIG-AEDLDHFG-- 154

Query: 166 YEKLPKVVPYVVLPLSMLLMLLRFAQAAMQILRGDVDRLVASHEVEDEIAEVQAQRGE 223
              + +    VV+P+   L+LLR+ +  + +LRG    L     + DE AE     GE
Sbjct: 155 ---ILQAYIAVVVPVGFGLVLLRYLEILVNLLRGRQLGL----GLADEAAEASKLAGE 205