Pairwise Alignments

Query, 467 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, large permease component (from data) from Phaeobacter inhibens DSM 17395

Subject, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  648 bits (1671), Expect = 0.0
 Identities = 331/467 (70%), Positives = 392/467 (83%), Gaps = 14/467 (2%)

Query: 1   MDVVLLFSMVIGLLLIGVPIAVALGLSSTLFLLIYSDSSLASVAGTLFEAFEGHFTLLAI 60
           M V LLF +VIG++++GVPIA++LGLSS LFLL +SD+SLASVA TLF AF GH+TLLAI
Sbjct: 1   MAVALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAI 60

Query: 61  PFFILASSFMTTGGVARRIIRFSIACVGHLPGGLAIAGVFACMLFAALSGSSPATVVAIG 120
           PFFILAS+FM+TGGVA+RIIRF+IA VG   GGLAIA V ACM+FAALSGSSPATVVAIG
Sbjct: 61  PFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIG 120

Query: 121 SIVIAGMRQVGYSKEFAAGVICNAGTLGILIPPSIVMVVYAAAVEVSVGRMFLAGVIPGL 180
           SIVIAGM + GYSKEFAAGVICNAGTLGILIPPSIVMVVY+AA  VSVGRMFL GV+PGL
Sbjct: 121 SIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGL 180

Query: 181 MAGLMLMVTIYVMAKVKNLPKGEWLGWGEVAASAANASVGLLLIGIILGGIYGGIFTPTE 240
           +AGLML++ IY+ A++KNLPK  ++GW E   +A  AS GLLL+ IILGGIYGGIFTPTE
Sbjct: 181 LAGLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTE 240

Query: 241 AAAVASVYAFFVATFVYRDMGPLKSAPKPKDMGQFLTMLPKMLGQTVVYFIPSFFHADTR 300
           AAAVA+VY+FF+A F+YRDMGP       K +              +V  + +F H DT+
Sbjct: 241 AAAVAAVYSFFIANFIYRDMGPFADKTNTKPV--------------LVKVVETFVHKDTK 286

Query: 301 HALFEAGKLTVTLLFVIANALILKHVLTDEQVPQQIATAMLSAGFGPVMFLIVVNVILLI 360
             L++AGKLT+ L+F+IANALILKHVLT+E++PQ I  +MLSAG GP+ FLIVVN+ILL+
Sbjct: 287 ATLYDAGKLTIMLMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLV 346

Query: 361 GGQFMEPSGLLVIVAPLVFPIAIELGIDPIHLGIIMVVNMEIGMITPPVGLNLFVTSGVA 420
           GGQFMEPSGLLVIVAPLVFPIAI LGIDPIHLGI+MVVNMEIGMITPPVGLNLFVTSGVA
Sbjct: 347 GGQFMEPSGLLVIVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVA 406

Query: 421 GMPMMAVVRAALPFLAVLFVFLIMITYIPWISTVLPNAVMGPEIITK 467
            M MM VV+AALP++ V+F+FLI++TY+PW+ST LP  +MGPEIIT+
Sbjct: 407 KMSMMNVVKAALPWVGVMFLFLIIVTYVPWVSTWLPTLLMGPEIITR 453