Pairwise Alignments

Query, 467 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, large permease component (from data) from Phaeobacter inhibens DSM 17395

Subject, 909 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  234 bits (596), Expect = 1e-65
 Identities = 143/461 (31%), Positives = 237/461 (51%), Gaps = 38/461 (8%)

Query: 5   LLFSMVIGLLLIGVPIAVALGLSSTLFLLIYSDSSLASVAGTLFEAFEGHFTLLAIPFFI 64
           ++ + +  LL  G+PIA ALGL++   L + S + +  V G    +   +   ++IP F+
Sbjct: 1   MIVACLFVLLATGMPIAFALGLAAFAALYMQSGAGIFYVLGDTMFSGIANLAYVSIPMFV 60

Query: 65  LASSFMTTGGVARRIIRFSIACVGHLPGGLAIAGVFACMLFAALSGSSPATVVAIGSIVI 124
           L  + + +      +       +  +PGGL ++ + AC +F+ ++GSSPAT  AIG + I
Sbjct: 61  LMGAAVASSPAGSDLYTSLDRWLNRIPGGLILSNIGACAIFSGMTGSSPATCAAIGKMGI 120

Query: 125 AGMRQVGYSKEFAAGVICNAGTLGILIPPSIVMVVYAAAVEVSVGRMFLAGVIPGLMAGL 184
             M + GY    A+G I   GTLGILIPPS+ ++VY  A E S+GR+F+AG++PG++  +
Sbjct: 121 PEMMRRGYPASVASGSIAAGGTLGILIPPSVTLIVYGIATETSIGRLFMAGILPGILLTI 180

Query: 185 MLMVTIYVMAKVKNLPKGEWL---GWGEVAASAANASVGLLLIGIILGGIYGGIFTPTEA 241
           M M    +  K K       L      E  A        LL+I   L  +YGGI TP+EA
Sbjct: 181 MFMTWAVIDCKRKGYEFEARLVRYSMKERLAVLPRILPFLLIIAGTLYVLYGGIATPSEA 240

Query: 242 AAVASVYAFFVATFVYRDMGPLKSAPKPKDMGQFLTMLPKMLGQTVVYFIPSFFHADTRH 301
           A                              G FLT+   ++   +  F P         
Sbjct: 241 AGA----------------------------GAFLTLAVVIVAYRLFRFRP------VAG 266

Query: 302 ALFEAGKLTVTLLFVIANALILKHVLTDEQVPQQIATAMLSAGFGPVMFLIVVNVILLIG 361
               A K +V ++ ++A A +    L+   + Q +A A+        + + V+NV LLI 
Sbjct: 267 IFGSAMKESVMIMMIMAAAELFAFALSSLFITQTVAAAIADMEVNRWVLMAVINVFLLIC 326

Query: 362 GQFMEPSGLLVIVAPLVFPIAIELGIDPIHLGIIMVVNMEIGMITPPVGLNLFVTSGVA- 420
           G F+ P  ++V+ +P++FPI  + G DP    I++ +NME+G+ITPP+GLNLFV + +A 
Sbjct: 327 GMFLPPVAVIVMTSPMLFPIVTQAGFDPYWFAIVLTINMEVGLITPPIGLNLFVINAIAP 386

Query: 421 GMPMMAVVRAALPFLAVLFVFLIMITYIPWISTVLPNAVMG 461
            +P   ++  +LP++ V+F+ +I++   P ++T LPN ++G
Sbjct: 387 QIPTKDILWGSLPYVLVMFLAIILLCVFPDVATWLPNQMLG 427