Pairwise Alignments

Query, 467 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, large permease component (from data) from Phaeobacter inhibens DSM 17395

Subject, 427 a.a., C4-dicarboxylate large membrane transport protein from Sinorhizobium meliloti 1021

 Score =  263 bits (672), Expect = 8e-75
 Identities = 152/466 (32%), Positives = 242/466 (51%), Gaps = 44/466 (9%)

Query: 1   MDVVLLFSMVIGLLLIGVPIAVALGLSSTLFLLIYSDSSLASVAGTLFEAFEGH---FTL 57
           MD+++LF +   L+LIG PIA  LG++S   +L      L      +F+        F+L
Sbjct: 1   MDMMILFGVFTLLMLIGTPIAFCLGVASFATVLYLGLPPLV-----IFQRLNSGMSVFSL 55

Query: 58  LAIPFFILASSFMTTGGVARRIIRFSIACVGHLPGGLAIAGVFACMLFAALSGSSPATVV 117
           LAIPFFI A   M  GG+A++I+ F+ + VGH+ GGL    +    LF  +SGS+ A   
Sbjct: 56  LAIPFFIYAGDLMVRGGIAQKIVAFAASLVGHIRGGLGQVNIVTATLFGGISGSAVAEAA 115

Query: 118 AIGSIVIAGMRQVGYSKEFAAGVICNAGTLGILIPPSIVMVVY--AAAVEVSVGRMFLAG 175
           A+G ++I  M+Q GY  ++A  V   A  + +++PPS  M++Y  +A  ++S+  +F AG
Sbjct: 116 AVGGLMIPQMKQRGYGADYAVNVTSMAALIALMLPPSHNMIIYSISAGGKISIADLFTAG 175

Query: 176 VIPGLMAGLMLMVTIYVMAKVKNLPKGEWLGWGEVAASAANASVGLLLIGIILGGIYGGI 235
           ++PGL+    LM T Y +A+ +  P   + G+  V      ++ GLLLIGII GG+  G+
Sbjct: 176 ILPGLLYAAALMATAYFVARRRGYPTEVFPGFARVGRYLLISTPGLLLIGIIFGGVRSGV 235

Query: 236 FTPTEAAAVASVYAFFVATFVYRDMGPLKSAPKPKDMGQFLTMLPKMLGQTVVYFIPSFF 295
           FT TE++ +A +YA  V  FVYR M                                   
Sbjct: 236 FTATESSCIAVLYALAVTVFVYRQM----------------------------------T 261

Query: 296 HADTRHALFEAGKLTVTLLFVIANALILKHVLTDEQVPQQIATAMLSAGFGPVMFLIVVN 355
             D   A F A + T  +L +I  A     ++   +VP  +   M +    P++ L+++N
Sbjct: 262 WQDFVQATFAAVRTTAMVLLIIGMAAAFSWLMAFLRVPAALIDWMNTISENPIIILLLLN 321

Query: 356 VILLIGGQFMEPSGLLVIVAPLVFPIAIELGIDPIHLGIIMVVNMEIGMITPPVGLNLFV 415
           V++L  G FM+    ++I  P+  P+A+  G+DP+H G+IM++N  IG+ TPPVG   FV
Sbjct: 322 VLMLFLGTFMDMGPTIIICTPIFLPVAMAYGVDPVHFGVIMILNFGIGLNTPPVGAVQFV 381

Query: 416 TSGVAGMPMMAVVRAALPFLAVLFVFLIMITYIPWISTVLPNAVMG 461
              V  + +   +R+  PF     + L ++TY+P +S  LP    G
Sbjct: 382 ACAVGKISVWEAMRSIWPFYLAGLIVLGLVTYVPALSLWLPAVFKG 427