Pairwise Alignments

Query, 467 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, large permease component (from data) from Phaeobacter inhibens DSM 17395

Subject, 437 a.a., large C4-dicarboxylate uptake permease, DedA family protein from Sinorhizobium meliloti 1021

 Score =  236 bits (601), Expect = 1e-66
 Identities = 151/456 (33%), Positives = 230/456 (50%), Gaps = 38/456 (8%)

Query: 9   MVIGLLLIGVPIAVALGLSSTLFLLIYSDS-SLASVAGTLFEAFEGHFTLLAIPFFILAS 67
           +V+ L L+  PI  A+ + +  F LI  D   LA+ A  + E  +   +LLA+P F+LA 
Sbjct: 12  LVVVLFLLSTPITWAMAIGAFAFFLINMDMIPLANFAQEMAEGSQS-VSLLALPLFVLAG 70

Query: 68  SFMTTGGVARRIIRFSIACVGHLPGGLAIAGVFACMLFAALSGSSPATVVAIGSIVIAGM 127
             M   G+ RR++  +   VGH+ G LA        L   L+ S+ A    +   +   M
Sbjct: 71  CIMNASGITRRLLALADVLVGHMTGALAQMCTVLGTLLGGLTASANADAAMLAKTLGVEM 130

Query: 128 RQVGYSKEFAAGVICNAGTLGILIPPSIVMVVYAAAVEVSVGRMFLAGVIPGLMAGLMLM 187
            Q GYS+ FAA +  +A  +  LIPPSI ++VY    E S+GR+F AGVIPGL+    LM
Sbjct: 131 SQRGYSRAFAAVITSSAAIITSLIPPSIGLIVYGFLAETSIGRLFAAGVIPGLVLATGLM 190

Query: 188 VTIYVMAKVKNLP--KGEWLGWGEVAASAANASVGLLLIGIILGGIYGGIFTPTEAAAVA 245
           VT Y +A+ +     + E     E   +  +    L +  +I  G   G+FT TEA AV 
Sbjct: 191 VTTYFIARKRGYKPLRKERATRAEGVRALIDGLWALSIPVVIFAGTRYGLFTTTEAGAVV 250

Query: 246 SVYAFFVATFVYRDMGPLKSAPKPKDMGQFLTMLPKMLGQTVVYFIPSFFHADTRHALFE 305
            VY  FVA F YR+                                  F        L E
Sbjct: 251 VVYVLFVAVFGYRE----------------------------------FTFRQIPEVLAE 276

Query: 306 AGKLTVTLLFVIANALILKHVLTDEQVPQQIATAMLSAGFGPVMFLIVVNVILLIGGQFM 365
           A + +  ++ +I  A      L  EQVPQ ++  +  A   P++ L+++NV+L++ G  +
Sbjct: 277 AVRDSAVVMIMICAAAAFGFYLAWEQVPQAMSGWLGEATDNPLLMLLLINVLLIVIGTAI 336

Query: 366 EPSGLLVIVAPLVFPIAIELGIDPIHLGIIMVVNMEIGMITPPVGLNLFVTSGVAGMPMM 425
           E S  L+I+ P++ PI   +GID +H G++ + N+ I  ITPPVG  ++++S V  +PMM
Sbjct: 337 EGSAALIILTPMLIPIIDGVGIDRVHFGVVFITNLTIAGITPPVGGLMYISSMVLKVPMM 396

Query: 426 AVVRAALPFLAVLFVFLIMITYIPWISTVLPNAVMG 461
           A  R  LP+LA++ V L+M++  P +S  LPN V G
Sbjct: 397 AYAREVLPYLAMMMVILVMLSMFPQLSLWLPNLVYG 432