Pairwise Alignments

Query, 467 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, large permease component (from data) from Phaeobacter inhibens DSM 17395

Subject, 468 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  250 bits (638), Expect = 8e-71
 Identities = 155/507 (30%), Positives = 256/507 (50%), Gaps = 93/507 (18%)

Query: 3   VVLLFSMVIGLLLIGVPIAVALGLSSTLFLLIYSDSSLASVAGTLFEAFEGHFTLLAIPF 62
           ++LL    + L+L+GVP+A+++  +S L+L+ Y+ +     A  +    E  F LLA+PF
Sbjct: 1   MLLLVGSFLVLMLVGVPVAISMAAASVLYLVSYNVAPDIIAAQRMIAGVES-FPLLAVPF 59

Query: 63  FILASSFMTTGGVARRIIRFSIACVGHLPGGLAIAGVFACMLFAALSGSSPATVVAIGSI 122
           FILA + M + GV  RI  F++A VG + GGLA   +   ++F+ +SG++ A    IG+I
Sbjct: 60  FILAGNLMNSAGVTGRIYSFAVALVGWMKGGLAQVNIVGSVIFSGMSGTALADAAGIGTI 119

Query: 123 VIAGMRQVGYSKEFAAGVICNAGTLGILIPPSIVMVVYAAAVEVSVGRMFLAGVIPGLMA 182
            I  M+  GY  + A GV   + TLG + PPS+  V+Y     VS+G +F+AGV+PG++ 
Sbjct: 120 EIKAMKDHGYPVDAAVGVTAASATLGPIFPPSLPFVIYGMMANVSIGALFMAGVVPGVVM 179

Query: 183 GLMLMVTIYVMAKVKNLPKGEWLGWGE------------------------------VAA 212
            +++M+T+ + A  +        GWG                                A 
Sbjct: 180 TVLMMLTVAIFAYKR--------GWGSDTPFEMKRLLAASLEVVVVLAVPLFIYLLMAAG 231

Query: 213 SAANASVGLLLIG--------------------IILGGIYGGIFTPTEAAAVASVYAFFV 252
            + N +VG+ L+                     I++GG+  G FTPTEAA  A +++ F+
Sbjct: 232 LSMNLAVGIALVVLLALDWYFDFSAVMALMTPIILIGGMTMGWFTPTEAAVAAVIWSLFL 291

Query: 253 ATFVYRDMGPLKSAPKPKDMGQFLTMLPKMLGQTVVYFIPSFFHADTRHALFEAGKLTVT 312
               YR M                TM                  +    A F+  + T +
Sbjct: 292 GLVRYRTM----------------TM------------------STLARATFDTIETTAS 317

Query: 313 LLFVIANALILKHVLTDEQVPQQIATAMLSAGFGPVMFLIVVNVILLIGGQFMEPSGLLV 372
           +LF++  A I   +LT  Q  Q ++ A+L+      +FLI+VN+++L  G F++    + 
Sbjct: 318 VLFIVTAASIFAWLLTVSQAAQMLSGAILTITDNKWVFLILVNLLMLFVGCFLDTIAAIT 377

Query: 373 IVAPLVFPIAIELGIDPIHLGIIMVVNMEIGMITPPVGLNLFVTSGVAGMPMMAVVRAAL 432
           I+ P++ P+  + GIDP+H G+IM +N+ IG++ PP+G+ LFV S VA + +     A L
Sbjct: 378 ILVPILLPLTAQFGIDPVHFGLIMTLNLMIGLLHPPLGMVLFVLSRVAKLSVERTTMAIL 437

Query: 433 PFLAVLFVFLIMITYIPWISTVLPNAV 459
           P+L  LF+ LI+IT++P +   LP +V
Sbjct: 438 PWLVPLFIALILITFVPAVVLWLPQSV 464