Pairwise Alignments

Query, 467 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, large permease component (from data) from Phaeobacter inhibens DSM 17395

Subject, 426 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  241 bits (616), Expect = 3e-68
 Identities = 142/457 (31%), Positives = 242/457 (52%), Gaps = 41/457 (8%)

Query: 1   MDVVLLFSMVIGLLLIGVPIAVALGLSSTLFLLIYSDSSLASVAGTLFEAFEGHFTLLAI 60
           M + +    ++G + +GVPIA AL LS    +L         VA  +    +  F L+A+
Sbjct: 1   MTISIFLGALLGPMALGVPIAFALILSGVALMLYLGLFDAQIVAQNVLNGADS-FPLMAV 59

Query: 61  PFFILASSFMTTGGVARRIIRFSIACVGHLPGGLAIAGVFACMLFAALSGSSPATVVAIG 120
           PFF+LA   M TGG++RRI+  ++A VGH+ GGL    +FA  + ++LSGS+ A   A+G
Sbjct: 60  PFFLLAGEVMNTGGLSRRIVALAMAMVGHIRGGLGFVAIFAACILSSLSGSAVADAAALG 119

Query: 121 SIVIAGMRQVGYSKEFAAGVICNAGTLGILIPPSIVMVVYAAAVEVSVGRMFLAGVIPGL 180
           ++++  M + G+    A+G+I +A  +G +IPPSI  +++     VS+ ++FLAG+ PGL
Sbjct: 120 ALLLPMMLKSGHDPARASGLIASASIIGPIIPPSIGFILFGVVGGVSITKLFLAGIFPGL 179

Query: 181 MAGLMLMVTIYVMAKVK--NLPKGEWLGWGEVAASAANASV-GLLLIGIILGGIYGGIFT 237
           M    L +T  ++A+ +   LP  +    G +   A   S+  L L  II+ G+  G+FT
Sbjct: 180 MIAAALSITWLIVARKEQFELPPRQ---SGRLRLRAFVDSLWALFLPVIIIAGLKFGVFT 236

Query: 238 PTEAAAVASVYAFFVATFVYRDMGPLKSAPKPKDMGQFLTMLPKMLGQTVVYFIPSFFHA 297
           PTEA  +A+VY+ FV+  VYR++ P                                  A
Sbjct: 237 PTEAGVIAAVYSLFVSMVVYRELAP----------------------------------A 262

Query: 298 DTRHALFEAGKLTVTLLFVIANALILKHVLTDEQVPQQIATAMLSAGFGPVMFLIVVNVI 357
              H    A K++  ++F++A A +   ++T   VP  +A  +          LI + V+
Sbjct: 263 QLFHVFVSAAKISAVVMFLVACAAVSAWLITVADVPGALAALLEPLMGNQTALLIAIMVL 322

Query: 358 LLIGGQFMEPSGLLVIVAPLVFPIAIELGIDPIHLGIIMVVNMEIGMITPPVGLNLFVTS 417
           ++I G  M+ +  ++I+ P++ P+  + GIDP++ G++ ++N  IG+ITPPVG  L V  
Sbjct: 323 IVIVGTAMDMTPTILIMTPVLMPVIKQAGIDPVYFGVLFIINNSIGLITPPVGTVLNVIC 382

Query: 418 GVAGMPMMAVVRAALPFLAVLFVFLIMITYIPWISTV 454
           GV+ + M  +++  +PFL    + L ++   P + TV
Sbjct: 383 GVSKLSMEDLMKGVMPFLFAELIVLFLLVLFPELVTV 419