Pairwise Alignments

Query, 407 a.a., Uncharacterized protein conserved in bacteria from Phaeobacter inhibens DSM 17395

Subject, 260 a.a., transcriptional regulator, XRE family from Synechococcus elongatus PCC 7942

 Score = 57.4 bits (137), Expect = 5e-13
 Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 29/167 (17%)

Query: 28  RLGDIMRGERATMGKSLLDVQRELRIKASYIAAIENSDPTVFDTPGFIAGYVRSYARYLN 87
           R+G  +R  R   G  L  V  + R+++SY+ AIE+ +      P F+ G++R+YAR L 
Sbjct: 13  RIGAELRAAREAQGLDLAAVAAQCRVRSSYLEAIESGEVQRLPEPVFVQGFIRTYARSLG 72

Query: 88  MNPDTTFDSFCQESGFQVAHGMSAEASVRKSAGAPIATGMGGLRSDAFTSPNTPFVPAAS 147
           ++PDT             A   +A A+ R      +                        
Sbjct: 73  LDPDTLLADLSLADIHLAATPATAAATQRSKVAIALP----------------------- 109

Query: 148 GVFSQIELRAVGSLAVLVALIGGIGYGGWAVLKEVQQVQMAPVEQTP 194
              S+  L  +G + V+VA I G G   W      QQ+  AP    P
Sbjct: 110 ---SKASLGLLGLVVVIVAAIAGTGVTVW---NWRQQIAFAPTATAP 150



 Score = 32.3 bits (72), Expect = 2e-05
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 6/100 (6%)

Query: 262 VVLADASLSAEAPLP---AMPQVVEETAPALQMVAVR-PSWVQVTAVDGSVIFETIMEPG 317
           +  A  + + E P P   A+     E  P    +A R P+W +++ VDG V+F  +   G
Sbjct: 141 IAFAPTATAPEPPPPPEAALSTTPLEPEPRTVAIAFRGPAWAEIS-VDGEVVFSGMGTAG 199

Query: 318 QHFEIPATEEAPLLRTGESGAIYFAVNGAHYGPVGDRGQV 357
           Q       +E   +  G    I+ +  G    P+G   QV
Sbjct: 200 QQLSFSPKQEV-TINPGRPDLIWLSRAGQAAQPLGTISQV 238