Pairwise Alignments

Query, 833 a.a., penicillin-binding protein 1A MrcA from Phaeobacter inhibens DSM 17395

Subject, 771 a.a., penicillin-binding protein 1A from Herbaspirillum seropedicae SmR1

 Score =  430 bits (1106), Expect = e-124
 Identities = 283/769 (36%), Positives = 421/769 (54%), Gaps = 73/769 (9%)

Query: 2   VRFILSFFGSIFSTITLGIAMIALTIGAVFWI---YGRDLPSHESLAQYQPPTISRIYSG 58
           +R +L   G+IF     G+A++ L +G  F +   Y + LP  ++L  Y+P    RI+S 
Sbjct: 5   LRILLGLVGTIF-----GLAVMVL-LGVTFIVALTYPK-LPDLDTLTDYRPKIPLRIFSA 57

Query: 59  EGALIDEFAQERRLFTPSEEIPDLVKQAFISAEDKNFYSHNGYDMRGIAAAAVEAVRSRG 118
           +G LI EF +ERR     ++IP+++K+A ++ ED  FY H G D +GIA A    +   G
Sbjct: 58  DGVLIGEFGEERRNLVHFKDIPEIMKKAVLAIEDDRFYEHGGVDYQGIARATFSNLSGGG 117

Query: 119 SNVRGASTITQQVMKNFLLSGD-----RKAERKV-KELILASRLEETLSKDKILELYMNE 172
               GASTITQQV +NF L+ +     +KA RK   E+ LA ++E  L+KD+ILE+YMN+
Sbjct: 118 G---GASTITQQVARNFFLTSNEPTFLQKATRKFFYEIPLAWKIENNLTKDQILEVYMNQ 174

Query: 173 IFLGQNSYGVTAAAQTYFNKTLSELTPHEAATLASMPKAPSDYHPVRQKQRLLNRRNYVL 232
           I+LGQ +YG  +AAQ YF K L +LT  EAA LA +PKAPS Y+PV   +R   R+ Y+L
Sbjct: 175 IYLGQRAYGFASAAQIYFGKQLKDLTIAEAAMLAGLPKAPSAYNPVVNPKRAHARQQYIL 234

Query: 233 REMRENGYISDAVYKVEVDQPLRSVQNGDFDSFRTALPPRDYFTDEIRRQLSEDFGEGEF 292
             MR+ GYI+DA Y+   D+ LR    GD  +F         +  E+ RQL     + E 
Sbjct: 235 LRMRQLGYITDAQYQAAKDEELR--VKGDSSAFGM----HAEYVAEMARQLVYAQYKDET 288

Query: 293 FTGGFTVRATIDEEMQTEAAVALRGGLEKYDRSRGNWRGTGVTLDAEALASEESWRAALS 352
           +T G  V  TI +  Q  A +ALR G+  Y+R  G +RG    +D    A++++   A+ 
Sbjct: 289 YTRGLNVFTTITKTDQDAAYIALRRGIIDYERRHG-YRGPEGYMDLPENATKDAVEDAV- 346

Query: 353 NASVPRDINLGGKWHP-------AVALEVGDQSLRVGIEEVAEIGSVPRSDIKWMKGSFK 405
                 ++ L    HP       AV LE   + +   +    EI S+  + + +      
Sbjct: 347 ------EVELAD--HPDSDDMVSAVVLEAKPKEITAMLSTGEEI-SISGAGLGFGANLLS 397

Query: 406 D------NISAGDVVLVRAVEKDGALQHWSLRQVPEVQGGFVAMDVNTGRVLAMQGGFSY 459
           D       I  G ++    V +DG   +W + Q+PEV+  FV+++   G + ++ GGF +
Sbjct: 398 DKAPPQKKIRRGAII---RVFQDG--NNWIITQMPEVESAFVSVNSQDGAIRSLVGGFDF 452

Query: 460 QHSVFNRATQAQRQPGSSFKPFVYAAALDSGYSPATIVVDAPIEINTPQG-LWRPKNSSN 518
             + FN  TQA RQPGSSFKPF+Y+++L+ G SPATI+ DAP+      G +W+PKN   
Sbjct: 453 NRNKFNHVTQAWRQPGSSFKPFIYSSSLEKGLSPATIINDAPLTFTQTGGQVWQPKNYGG 512

Query: 519 KFYGPTPLRTGIEMSRNLMTIRLAQEVGMEVVAGYAERFGV-YNNMGAFLANSLGAEETT 577
           KF GP  +R  ++ S NL++IR+ + VG++    Y  RFG   +    +L  +LGA   T
Sbjct: 513 KFEGPISMRRALQKSINLVSIRILERVGVKYAQEYITRFGFDADKNPPYLTLALGAGNVT 572

Query: 578 LYKMVAAYAMFANGGERVQPTLVDRIQDRRGETIYRHDDRDCVDCASPALAAGQAPRIVD 637
             +MV AY++FANGG ++ P L+ ++ D  GE + +         A PA A  ++ R++D
Sbjct: 573 PLQMVGAYSVFANGGYKINPYLITKVTDSNGEVLSQ---------AKPATADDESNRVID 623

Query: 638 NREQVMDPITAYQLTSMMRGVVDRGTASSVIDLP-VPTAGKTGTTNDSRDVWFVGFTSNI 696
            R        A+ + SM+R VV  GTA   + L     AGKTGTTNDS D WF G+   +
Sbjct: 624 AR-------NAFIMDSMLRDVVRHGTAVKALSLKRTDLAGKTGTTNDSMDAWFAGYQPGL 676

Query: 697 VAGCYMGYDQPRPMGRGAYGGTMCGPVFQQFMKKATAKYGGGKFAVPEG 745
            A  ++GYDQP+ +G    GG +  PV+  +M KA          VP+G
Sbjct: 677 TAIAWIGYDQPKSLGDRETGGGLALPVWISYMSKALKDVPNVDRKVPDG 725