Pairwise Alignments

Query, 360 a.a., TRAP transporter, subunit DctP from Phaeobacter inhibens DSM 17395

Subject, 364 a.a., ABC transporter substrate-binding protein from Azospirillum brasilense Sp245

 Score =  214 bits (544), Expect = 4e-60
 Identities = 117/321 (36%), Positives = 179/321 (55%), Gaps = 4/321 (1%)

Query: 1   MDRRSFLKTSALGGSAAAATTLAAPAYAQGKRTLT--MVTTWGRGLAGVHDSAQYVADAI 58
           M RRSFL ++ +G   AA+T +AAPA AQ +  +   M +++ + L  +   A+ +A  +
Sbjct: 1   MKRRSFLASAGVG--LAASTVVAAPAIAQSQPEIKWRMASSYPKSLDTIFGGAELIARRV 58

Query: 59  TAMSGGDLTVDVKAAGELVGAFEVFDAVTAGQADMYHGADYYFTGQHPGYAYFTAVPFGM 118
            A +     +   AAGE+V A +V DAV  G  +    A Y++ G+ P + + TA+PFG+
Sbjct: 59  AAATDNKFQIRTFAAGEIVPALQVLDAVQNGTIECGQSAAYFYIGKDPTFCFDTAMPFGL 118

Query: 119 TPQELTNWYYHGDGHALHDELGQIFGLKSFIGGNTGPQAGGWYNKEIKGPEDFNGLKFRM 178
             ++  +W  HG G  L  EL +   + +   GNT  Q GGW+ KEIK  ED +GLK R+
Sbjct: 119 NTRQHISWMMHGGGLELMRELFREHNIYNIPAGNTTAQMGGWFRKEIKTVEDLSGLKMRV 178

Query: 179 PGLGGKALGKLGASVQNIPGSEVYQALSSGAIDGTEWIGPWADEKAGFQEITKTYYTAGF 238
            GL G+ +GKLG   Q I G ++Y AL  G ID  E++GP+ DEK GF ++ K YY+ G+
Sbjct: 179 GGLAGQIMGKLGLVPQQIGGGDIYPALERGTIDAAEFVGPYDDEKLGFHKVAKYYYSPGW 238

Query: 239 HEPGAALSVATNRDVFEGLSPAHQKVIEMASAAGHQWSLAQFMNNNGAALQRLQSGGVKT 298
            E  A + +  N   +E L  +++ ++E A    + W +A++   N AAL+RL +GG + 
Sbjct: 239 WEGSAQIPLMINITAWEQLPESYKTILEQACWEANTWMIAKYDAVNAAALKRLVAGGAQL 298

Query: 299 LEFPDSVWDAFGSATKETLDE 319
             FP  V  A      E  DE
Sbjct: 299 RAFPRDVMMACEKIANELYDE 319