Pairwise Alignments

Query, 785 a.a., TRAP transporter, subunit DctM from Phaeobacter inhibens DSM 17395

Subject, 503 a.a., C4-dicarboxylate ABC transporter from Azospirillum brasilense Sp245

 Score =  147 bits (372), Expect = 1e-39
 Identities = 83/187 (44%), Positives = 114/187 (60%), Gaps = 28/187 (14%)

Query: 115 ERVLAGASIETLLAVLMFVLMGITLERSKIANDLLTTMARVFGPLPGGLAVSIVVVGAFL 174
           ERV      +TLLA+  F  MG+ LERS +A DLL T+ ++FGPL GGLA +++ VGA L
Sbjct: 58  ERVFGIMRNDTLLAIPFFTFMGLILERSGMAEDLLDTVGQLFGPLRGGLAYAVIFVGALL 117

Query: 175 AASTGIVGATVVTMGLLALPTMLRNNYSPELATGVIAASGTLGQIIPPSIVIVLLGTLAG 234
           AA+TG+V A+V++MGL++LP MLR  Y   LA+GVIAASGTL QIIPPS+V+++L    G
Sbjct: 118 AATTGVVAASVISMGLISLPIMLRYGYDRRLASGVIAASGTLAQIIPPSLVLIILADQLG 177

Query: 235 DLYSTAQEARAQEFGCSDALTYLGEPAVVSVGTLFQAALLPGIMLALLYALYAFGYALLN 294
                                        SVG ++  AL+PG++L  LYA Y    +++ 
Sbjct: 178 R----------------------------SVGDMYAGALVPGLVLTGLYAGYILVVSIVR 209

Query: 295 PEKAPAV 301
           PE  PA+
Sbjct: 210 PEFTPAL 216



 Score =  137 bits (345), Expect = 1e-36
 Identities = 111/358 (31%), Positives = 179/358 (50%), Gaps = 56/358 (15%)

Query: 456 IGVLLIALVDVVAIAPTTSPGITVLLIALPTLLAL-YGCRIAAGRSARNDLIRVVFPPLI 514
           +G LL A   VVA +      I++ LI+LP +L   Y  R+A+G  A +  +  + PP +
Sbjct: 113 VGALLAATTGVVAASV-----ISMGLISLPIMLRYGYDRRLASGVIAASGTLAQIIPPSL 167

Query: 515 LIVAVLGSILGGITNPTPAAALGAG--------GAIMLAAYRK------LQDQGKS--GK 558
           +++ +L   LG       A AL  G        G I++ +  +      L  + +S  G 
Sbjct: 168 VLI-ILADQLGRSVGDMYAGALVPGLVLTGLYAGYILVVSIVRPEFTPALPPEARSLRGF 226

Query: 559 IIIWATFA------VAICILVGVNFDLRINGRSGVSAETVIAFGVAYGAYLFALFGLLYG 612
            +++          V I +++G  F        G++  T      A GA + AL      
Sbjct: 227 QLLFRVLTSLVPPLVLIFLVLGTIF-------IGIATPTEGGAMGAAGAMILALMKRQLS 279

Query: 613 CWVLFKGGVLTPVVRETAKVTSMVFTILIGSQLLNLVVISFGGEHYIQQFLKSFDS-ELK 671
            W L +  + T     TAK++S V  ILIGS +  LV  +  G+ +++  L S    EL 
Sbjct: 280 -WSLMRQAMDT-----TAKLSSFVIFILIGSTVFGLVFRAVNGDLWVEHLLTSLPGGELG 333

Query: 672 VFLIVMVVLFILGFVLDFLEIIYIVIPIVGPVIYGGSFDPKWVTIMVAVNLQTSFLTPPF 731
             ++V +++F+L F LDF E+ +I++P++ PV      D  W  +++ VN+QTSF+ PPF
Sbjct: 334 FLIVVNIMVFLLAFFLDFFELAFIIVPLLAPVAEKLGIDLIWFGVLLGVNMQTSFMHPPF 393

Query: 732 GFALFYLRGVAPKE-------------VTTAHIYRGVLPFVLIQVVGLGILWMFPSIV 776
           GFALF+LR VAP+E             +TT  IY G +PFV IQ++ + ++ MFP +V
Sbjct: 394 GFALFFLRSVAPREDYKDKITGKIIKKITTGQIYWGAVPFVCIQLIMVALVIMFPEMV 451