Pairwise Alignments

Query, 785 a.a., TRAP transporter, subunit DctM from Phaeobacter inhibens DSM 17395

Subject, 439 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 97.8 bits (242), Expect = 1e-24
 Identities = 101/379 (26%), Positives = 170/379 (44%), Gaps = 36/379 (9%)

Query: 412 IAKIDAAAPIGTG-LTVLMVLMGLVLAVGRGVSPSSDPKPLILGAIGVLLIALVDV---- 466
           I  +D +    TG L+ + VL G + A    +S S+     ++G  G+LL  + +     
Sbjct: 87  IETLDRSMGRSTGRLSYISVLCGTIFAA---LSGSNMANTAMMG--GLLLPQMEERKYQR 141

Query: 467 -VAIAPTTSPGITVLLIALPTLLALYGCRIAAGRSARNDLIRVVFPPLILIVAVLGSI-L 524
            ++I P    G   LLI   TL  L G    A  S  + L+  V P L+L +  + +I L
Sbjct: 142 HMSIGPIIGSGGLALLIPPSTLAVLLGS--IAQISIADLLLAGVLPGLVLALLYVATIWL 199

Query: 525 GGITNPTPAAALGAGGAIMLAAYRKLQDQGKSGKIIIWATFAVAICILVGVNFDLRINGR 584
               NP  A A     A      R +        +++   F V   IL+G+         
Sbjct: 200 QLRRNPQAAPAYDVVTAPFWEKIRLICTYILPMSLVV---FCVVGLILLGI--------- 247

Query: 585 SGVSAETVIAFGVAYGAYLFALFGLLYGCWVLFKGGVLTPVVRETAKVTSMVFTILIGSQ 644
                 T  +   A+G     +  +LYG    F   ++   +  T +V+ MVF I+I S+
Sbjct: 248 ------TTPSEAAAFGVLSVLVLSILYG---RFSWDMVAKSLEGTLRVSVMVFFIIIASK 298

Query: 645 LLNLVVISFGGEHYIQQFLKSFD-SELKVFLIVMVVLFILGFVLDFLEIIYIVIPIVGPV 703
             + V+   G    +  +  S++ + + + LI+ VVL ILG  +D + ++ + IPI  P+
Sbjct: 299 TFSQVLAFSGATSGMIAWATSYEFAPITMLLIMFVVLLILGMFVDAISMMLLTIPIFFPI 358

Query: 704 IYGGSFDPKWVTIMVAVNLQTSFLTPPFGFALFYLRGVAPKEVTTAHIYRGVLPFVLIQV 763
                FDP W  +++ + ++ S  TPPFG  LF ++GVAP   T   I R   P+++  +
Sbjct: 359 AAAMGFDPIWFGLVMLLAIEMSGTTPPFGLLLFVMQGVAPPGTTYWTIVRAAAPYLICDL 418

Query: 764 VGLGILWMFPSIVTIVPAL 782
           + L  L   P++   +P L
Sbjct: 419 ILLVGLIAVPALALWLPGL 437



 Score = 80.5 bits (197), Expect = 2e-19
 Identities = 59/175 (33%), Positives = 79/175 (45%), Gaps = 28/175 (16%)

Query: 126 LLAVLMFVLMGITLERSKIANDLLTTMARVFGPLPGGLAVSIVVVGAFLAASTGIVGATV 185
           L+ V MFVLMG     S IA  ++ T+ R  G   G L+   V+ G   AA +G   A  
Sbjct: 64  LVTVPMFVLMGNLFFHSGIALKIIETLDRSMGRSTGRLSYISVLCGTIFAALSGSNMANT 123

Query: 186 VTMGLLALPTMLRNNYSPELATGVIAASGTLGQIIPPSIVIVLLGTLAGDLYSTAQEARA 245
             MG L LP M    Y   ++ G I  SG L  +IPPS + VLLG++A            
Sbjct: 124 AMMGGLLLPQMEERKYQRHMSIGPIIGSGGLALLIPPSTLAVLLGSIAQ----------- 172

Query: 246 QEFGCSDALTYLGEPAVVSVGTLFQAALLPGIMLALLYALYAFGYALLNPEKAPA 300
                            +S+  L  A +LPG++LALLY    +     NP+ APA
Sbjct: 173 -----------------ISIADLLLAGVLPGLVLALLYVATIWLQLRRNPQAAPA 210