Pairwise Alignments

Query, 404 a.a., ribosomal RNA large subunit methyltransferase I from Phaeobacter inhibens DSM 17395

Subject, 396 a.a., putative SAM-dependent methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  195 bits (495), Expect = 2e-54
 Identities = 138/396 (34%), Positives = 194/396 (48%), Gaps = 8/396 (2%)

Query: 12  RVKLKPKANARALRHGFPWVYANELVTDRRTRKLAPGTLAVLEDDGMTSMGLVAINPESK 71
           R+KLKP    ++L    PWV+++  V + + + L   T+ V+  DG   +G  A +  S+
Sbjct: 4   RIKLKP-GREKSLDRRHPWVFSSG-VHNIKGKPLRGETVDVVAHDGRW-LGRGAWSDASQ 60

Query: 72  IIARMLDTDPAAEINQDWFETRLSRALALREQLY---DAPYYRLAHAESDGLPGVVIDRF 128
           I  R+   D    I++D+F  R++RA A RE L        YRL  AESDGLPG+ IDR+
Sbjct: 61  IQVRVWTFDKEEAIDRDFFARRIARAQAGREALIREKGLTGYRLVGAESDGLPGITIDRY 120

Query: 129 GDTCVVQPNAAWAEAHLDALTDALVAVTGVTTVLKNASGRARSLEGLDDVSTTLRGTTPE 188
            +  V Q  +A A+   + L   L        + + +   +R  EGL  V+  L G  P 
Sbjct: 121 ANVLVCQLLSAGADYWRETLVSVLAEQFPECAIYERSDVDSRKKEGLPLVTGLLHGELPA 180

Query: 189 APVQVTMNGATYMADLTGGQKTGLFYDQRDNHAFAAKLVKPGAKVLDVFSHVGGFGLAML 248
            P+ +  NG     D+  G KTG + DQRDN A A + V+ G  VL+ F + G FGL   
Sbjct: 181 MPLIIEENGIKIAVDVEKGHKTGFYLDQRDNRAMAGRFVE-GKSVLNCFCYTGTFGLYAA 239

Query: 249 AAGAAEATCVDGSAPALDLAREGAAASDF-ADRFAARQGDAFEVLTQLAEEGVQFDVVIC 307
            AGAA    VD S  ALD AR   A +    D     + D F++L Q  +EG  FDV++ 
Sbjct: 240 KAGAASIENVDVSTLALDTARHNMAINGLNDDHVTYSEADVFKLLRQYRDEGKTFDVIVL 299

Query: 308 DPPAFAPSKQALEAGLRAYERIAKLAAPLVAPGGCLGLCSCSHAADLSRFRNASARGIGR 367
           DPP FA +K  L    R Y+ I  +A  L+ PGG L   SCS       F+   A     
Sbjct: 300 DPPKFADNKAQLNGACRGYKDINMIAMQLLKPGGTLLTFSCSGLMPADLFQKIVADAALD 359

Query: 368 GGRRSQLLHTGYAGADHPQLPQLAESGYLKAVFFRL 403
            GR +Q +      +DHP      E  YLK +  R+
Sbjct: 360 AGRDAQFIERLSQASDHPIGAAFPEGFYLKGLVARV 395