Pairwise Alignments

Query, 343 a.a., ribosomal large subunit pseudouridine synthase C from Phaeobacter inhibens DSM 17395

Subject, 317 a.a., pseudouridine synthase, RluA family from Pseudomonas stutzeri RCH2

 Score =  159 bits (402), Expect = 9e-44
 Identities = 113/318 (35%), Positives = 167/318 (52%), Gaps = 24/318 (7%)

Query: 1   MITVSEDDADQRIDRWLRRLFPHVSQGRIEKMCRKGELRLDGGRVKANSRVAAGQVVRVP 60
           ++ V+ + A QRID +LR     V +  I ++ RKGE+R++ GR+K   ++ AG +VRVP
Sbjct: 13  ILEVAPELAGQRIDNFLRNQLKGVPKTLIYRILRKGEVRVNKGRIKPEYKLQAGDLVRVP 72

Query: 61  PLGASDLKPAEAPSYRISEADAKMIRGCVIYKDDAVIVLNKPAGLAVQGGSGTTKHVDGL 120
           PL  ++    E  +  + E   K I    +Y+D A+IVLNKPAG+AV GGSG +  V   
Sbjct: 73  PLRLAERDEPEPLAQGLLERLDKAI----VYEDKALIVLNKPAGIAVHGGSGLSYGVIEA 128

Query: 121 SAALQFDAEEKPRLVHRLDKDTSGVLVLARTRLAAQSLTAAFRHRATRKIYWALVAGVPT 180
              L+ DA+E   LVHRLD+DTSG+L++A+ R   + L  A R     K Y ALV G   
Sbjct: 129 LRQLRPDAKEL-ELVHRLDRDTSGLLMVAKKRSMLRHLHQALRGDGVDKRYMALVRGRWE 187

Query: 181 PYLGEIKCGLVKAPGHGKSGEGEKMIAIHSNEVDSTPGAKRSHTHYATLYRVASRAAWVA 240
               ++   L+K         GE+M+ +       T   K + T +  L R    A  V 
Sbjct: 188 TSKKQVNAPLLK----NTLRSGERMVEV-------TEDGKEALTLFHVLRRFGEFATLVE 236

Query: 241 MEPITGRTHQLRAHMAEIGHPIAGDGKYGGSSQENLGDGWGAQLGGIISKKLHLHCRRMA 300
            +P+TGRTHQ+R H    GH IAGD KYG        + +  ++  +  K+L LH   + 
Sbjct: 237 AKPVTGRTHQIRVHARHAGHSIAGDSKYG-------DEEFTREIRELGGKRLFLHAYALR 289

Query: 301 FEHPTTKKPLSITAPLPD 318
              P   + LS+ AP+ +
Sbjct: 290 VPLPDGGE-LSLEAPVDE 306