Pairwise Alignments

Query, 343 a.a., ribosomal large subunit pseudouridine synthase C from Phaeobacter inhibens DSM 17395

Subject, 320 a.a., ribosomal large subunit pseudouridine synthase D from Pseudomonas syringae pv. syringae B728a

 Score =  140 bits (354), Expect = 3e-38
 Identities = 111/318 (34%), Positives = 161/318 (50%), Gaps = 43/318 (13%)

Query: 11  QRIDRWLRRLFPHVSQGRIEKMCRKGELRLDGGRVKANSRVAAGQVVRVPPLGASDLKPA 70
           QR+D+   +LF   S+ R+    + G L +DGG ++    V  G V+ +       +   
Sbjct: 18  QRLDQVAAQLFAEHSRSRLSAWIKDGRLTVDGGALRPRDIVHGGAVLEL-------IAEQ 70

Query: 71  EAPSYRISEADAKMIRGCVIYKDDAVIVLNKPAGLAVQGGSGTTKHVDG--LSAALQF-- 126
           EA      E  A+ I   +IY+DD ++V+NKPAGL V   +G   H DG  L+A L    
Sbjct: 71  EAQG----EWVAQDIELDIIYEDDQILVINKPAGLVVHPAAG---HADGTLLNALLHHVP 123

Query: 127 DAEEKPR--LVHRLDKDTSGVLVLARTRLAAQSLTAAFRHRATRKIYWALVAGVPTPYLG 184
           D    PR  +VHRLDKDT+G++V+A+T  A   L    + R+  +IY  +V GV T    
Sbjct: 124 DIINVPRAGIVHRLDKDTTGLMVVAKTIQAQTQLVTQLQSRSVSRIYECIVIGVVT---- 179

Query: 185 EIKCGLVKAPGHGKSGEGEKMIAIHSNEVDSTPGAKRSHTHYATLYRVASRAAWVAMEPI 244
               G + AP  G+ G+  + +A+         G K++ +HY  L R  S    V ++  
Sbjct: 180 --AGGKIDAP-IGRHGQQRQRMAV-------MEGGKQAVSHYRVLERFRSH-THVRVKLE 228

Query: 245 TGRTHQLRAHMAEIGHPIAGDGKYGGSSQENLGDGWGAQLGGIISKKLH----LHCRRMA 300
           TGRTHQ+R HMA I +P+ GD  YGG  +        A L  + S K      LH R + 
Sbjct: 229 TGRTHQIRVHMAHINYPLVGDPAYGGRFRIPP----AASLTMVDSLKTFPRQALHARFLE 284

Query: 301 FEHPTTKKPLSITAPLPD 318
            +HPTT K +S  +PLPD
Sbjct: 285 LDHPTTGKRMSWESPLPD 302