Pairwise Alignments

Query, 343 a.a., ribosomal large subunit pseudouridine synthase C from Phaeobacter inhibens DSM 17395

Subject, 330 a.a., ribosomal large subunit pseudouridine synthase C protein from Sinorhizobium meliloti 1021

 Score =  274 bits (701), Expect = 2e-78
 Identities = 155/341 (45%), Positives = 205/341 (60%), Gaps = 27/341 (7%)

Query: 4   VSEDDADQRIDRWLRRLFPHVSQGRIEKMCRKGELRLDGGRVKANSRVAAGQVVRVPPLG 63
           V  D+A  R+DRW +  FP +  G ++K+ R G++R+DG R K+++R+  GQ +R+PPLG
Sbjct: 9   VDSDEAGMRLDRWFKVHFPGLGFGPLQKLLRSGQIRVDGARAKSDTRIQPGQTIRIPPLG 68

Query: 64  ASDLKPAEAPSYRIS------EADAKMIRGCVIYKDDAVIVLNKPAGLAVQGGSGTTKHV 117
                P EA S  I         D +++   V+++D  VIVLNKPAGLAVQGGSG  +H+
Sbjct: 69  VD---PKEAKSGPIGGRDLRQSPDGELLSRMVLHEDAKVIVLNKPAGLAVQGGSGVNRHI 125

Query: 118 DGLSAALQFDAEEKPRLVHRLDKDTSGVLVLARTRLAAQSLTAAFRHRATRKIYWALVAG 177
           D +  A      EKPRLVHRLD+DTSGVLV+ARTR AAQ LTAAFR R T+K YWALV G
Sbjct: 126 DKMLEAWTSQKGEKPRLVHRLDRDTSGVLVVARTRGAAQQLTAAFRERDTKKTYWALVRG 185

Query: 178 VPTPYLGEIKCGLVKAPGHGKSGEGEKM-IAIHSNEVDSTPGAKRSHTHYATLYRVASRA 236
           VP     +I   LVK P    + +G+++ IA H  +     GA  + ++Y  + +     
Sbjct: 186 VPRKREDKISTWLVKEP----TPDGDRVRIAKHGED-----GADHAISYYRIVEQAGQNL 236

Query: 237 AWVAMEPITGRTHQLRAHMAEIGHPIAGDGKYGGSSQENLGDGWGAQLGGIISKKLHLHC 296
           AW+ MEP TGRTHQLR H A IGHPI GD KY  +        W     G +  +LHLH 
Sbjct: 237 AWLEMEPYTGRTHQLRVHAAHIGHPIIGDPKYFEADV-----NW--TFPGGMQNRLHLHA 289

Query: 297 RRMAFEHPTTKKPLSITAPLPDHMKDSWDTFGWSEDLAAED 337
           R +   HP   + L ITAPLP HM  SW+  G+ E+ A E+
Sbjct: 290 RHIDIPHPNGGR-LKITAPLPQHMVQSWNLLGFDENAAGEE 329