Pairwise Alignments

Query, 343 a.a., ribosomal large subunit pseudouridine synthase C from Phaeobacter inhibens DSM 17395

Subject, 375 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

 Score =  136 bits (342), Expect = 1e-36
 Identities = 107/335 (31%), Positives = 157/335 (46%), Gaps = 46/335 (13%)

Query: 2   ITVSEDDADQRIDRWLRRLFPHVSQGRIEKMCRKGELRLDGGRVKANSRVAAGQVVRVPP 61
           I V  D   +R+D+ L  L P  S+ R++   R+G + L+G  V         Q  +   
Sbjct: 26  IFVPLDAGGRRLDQVLAELLPQYSRNRLQTWIREGRVSLNGQPV---------QEPKHKL 76

Query: 62  LGASDLKPAEAPSYRISEADAKMIRGCVIYKDDAVIVLNKPAGLAVQGGSGTTKHVDGLS 121
           LG   L   E    +++    + I   V+Y+D+A++++NKPAGL V  GSG       L+
Sbjct: 77  LGGEFLNLEEVQDEKLAAETPEDIPFPVVYEDEAILIINKPAGLVVHPGSGNWSGTL-LN 135

Query: 122 AALQFDAE--EKPR--LVHRLDKDTSGVLVLARTRLAAQSLTAAFRHRATRKIYWALVAG 177
           A L    +  + PR  +VHRLDKDTSG++V+A+T  A   L    + R  ++ Y AL+ G
Sbjct: 136 ALLHHTPQLAQVPRAGIVHRLDKDTSGLMVVAKTLEAQTDLVRQLQARTVKREYRALLVG 195

Query: 178 VPTPYLGEIKCGLVKAPGHGKSGEGEKMIAIHSNEVDSTPGAKRSHTHYATLYRVASRAA 237
               YL   + G V AP      +  KM  +  N        + + THY  L     R  
Sbjct: 196 ----YLN--RNGTVDAPIGRHPTQRTKMAVVQHN-------GREARTHYTVLEHF-ERCT 241

Query: 238 WVAMEPITGRTHQLRAHMAEIGHPIAGDGKYGGSSQENLGDGWGAQLGGIISKKLHLHCR 297
            V     TGRTHQ+R HMA +G P+ GD  Y      N G     +  G+   +  LH  
Sbjct: 242 LVQCRLETGRTHQIRVHMAALGFPLVGDAVY------NKG-----KTAGVRFPRQALHAY 290

Query: 298 RMAFEHPTTKKPLSITAPLPDHM-------KDSWD 325
           R+   HP T++P+   AP+PD M       +  WD
Sbjct: 291 RLGLIHPLTREPMQWDAPVPDDMAALLKTLRSEWD 325