Pairwise Alignments

Query, 343 a.a., ribosomal large subunit pseudouridine synthase C from Phaeobacter inhibens DSM 17395

Subject, 352 a.a., pseudouridine synthase, RluA family from Marinobacter adhaerens HP15

 Score =  159 bits (401), Expect = 1e-43
 Identities = 109/323 (33%), Positives = 170/323 (52%), Gaps = 28/323 (8%)

Query: 2   ITVSEDDADQRIDRWLRRLFPHVSQGRIEKMCRKGELRLDGGRVKANSRVAAGQVVRVPP 61
           +TV ED+  QR+D +L      V +  I ++ RKGE+R++ GRVK +SRV  G  VR+PP
Sbjct: 42  VTVDEDNEGQRVDNFLLAQLRGVPKSIIYRVIRKGEVRVNKGRVKPDSRVRTGDQVRIPP 101

Query: 62  LGASDLKPAEAPSYRISEADAKMIRGCVIYKDDAVIVLNKPAGLAVQGGSGTTKHVDGLS 121
           +   +     AP  R+      ++   V+++++ ++V+NKP+G+AV GGSG +    GL 
Sbjct: 102 ITRKEKPDQVAPGSRVQ----GVMESAVVFENEQMLVVNKPSGIAVHGGSGLS---FGLI 154

Query: 122 AALQF--DAEEKPRLVHRLDKDTSGVLVLARTRLAAQSLTAAFRHRATRKIYWALVAGVP 179
             L+      +   LVHRLD+DTSG++++A+ R A + L    R +  RK Y ALVAG  
Sbjct: 155 EVLRSARPTAKFLELVHRLDRDTSGLIMVAKKRSALRYLQDELRQKRIRKHYHALVAGDW 214

Query: 180 TPYLGEIKCGLVKAPGHGKSGEGEKMIAIHSNEVDSTPGAKRSHTHYATLYRVASRAAWV 239
              +  +   L++     +   GE+ + + +         K S T +  L   A  +  V
Sbjct: 215 PASVDRVDVPLLRY----EMPNGERRVKVDA-------AGKASLTTFRCLEHYAGYSL-V 262

Query: 240 AMEPITGRTHQLRAHMAEIGHPIAGDGKYGGSSQENLGDGWGAQLGGIISKKLHLHCRRM 299
              PITGRTHQ+R H A  GHPIAGD KY     +++       +GG   ++L LH R +
Sbjct: 263 EASPITGRTHQIRVHSAWAGHPIAGDDKY----MDDVSLKAFRSIGG---QRLMLHARAL 315

Query: 300 AFEHPTTKKPLSITAPLPDHMKD 322
            F  P + + + + AP  D   D
Sbjct: 316 EFTLPVSGEAMRLEAPYDDAFND 338