Pairwise Alignments

Query, 343 a.a., ribosomal large subunit pseudouridine synthase C from Phaeobacter inhibens DSM 17395

Subject, 331 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase from Klebsiella michiganensis M5al

 Score =  171 bits (434), Expect = 2e-47
 Identities = 114/321 (35%), Positives = 173/321 (53%), Gaps = 23/321 (7%)

Query: 1   MITVSEDDADQRIDRWLRRLFPHVSQGRIEKMCRKGELRLDGGRVKANSRVAAGQVVRVP 60
           M+ +++D+A QRID +LR     V +  I ++ RKGE+R++  RVK   ++ AG  VR+P
Sbjct: 24  MVAIADDEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRVKPEYKLEAGDEVRIP 83

Query: 61  PLGASDLKPAEAPSYRISEADAKMIRGCVIYKDDAVIVLNKPAGLAVQGGSGTTKHVDGL 120
           P+  S+ K  EA S  + +  A  +   ++Y+DD ++VLNKP+G AV GGSG +  V   
Sbjct: 84  PVRVSE-KEEEAVSPHLQKVAA--LADVILYEDDHILVLNKPSGTAVHGGSGLSFGVIEG 140

Query: 121 SAALQFDAEEKPRLVHRLDKDTSGVLVLARTRLAAQSLTAAFRHRATRKIYWALVAGVPT 180
             AL+ +A     LVHRLD+DTSGVL++A+ R A +SL    R +  +K Y ALV G   
Sbjct: 141 LRALRPEARFL-ELVHRLDRDTSGVLLVAKKRSALRSLHEQLRDKGMQKDYLALVRGQWQ 199

Query: 181 PYLGEIKCGLVKAPGHGKSGEGEKMIAIHSNEVDSTPGAKRSHTHYATLYRVASRAAWVA 240
            +   ++  L+K         GE+++ ++          K S T +    R  + A  V 
Sbjct: 200 SHTKVVQAPLLK----NILQSGERIVRVNQE-------GKPSETRFKVEERF-THATLVR 247

Query: 241 MEPITGRTHQLRAHMAEIGHPIAGDGKYGGSSQENLGDGWGAQLGGIISKKLHLHCRRMA 300
             P+TGRTHQ+R H    GHPIA D +YG          +  QL G    +L LH   + 
Sbjct: 248 CSPVTGRTHQIRVHTQYAGHPIAFDDRYGDRE-------FDKQLAGTGLNRLFLHAAALK 300

Query: 301 FEHPTTKKPLSITAPLPDHMK 321
           F HP + + + + APL + +K
Sbjct: 301 FTHPGSGEIMRVEAPLDNQLK 321