Pairwise Alignments

Query, 343 a.a., ribosomal large subunit pseudouridine synthase C from Phaeobacter inhibens DSM 17395

Subject, 348 a.a., pseudouridine synthase, RluA family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  451 bits (1160), Expect = e-131
 Identities = 216/342 (63%), Positives = 259/342 (75%)

Query: 2   ITVSEDDADQRIDRWLRRLFPHVSQGRIEKMCRKGELRLDGGRVKANSRVAAGQVVRVPP 61
           +TV  D+ DQR+DRWLRR FPH+ QGRIEKMCRKGELR+DGGRVK  +R+  GQ VRVPP
Sbjct: 7   LTVGVDEGDQRLDRWLRRRFPHLGQGRIEKMCRKGELRVDGGRVKPATRLQTGQAVRVPP 66

Query: 62  LGASDLKPAEAPSYRISEADAKMIRGCVIYKDDAVIVLNKPAGLAVQGGSGTTKHVDGLS 121
           L A     A     RIS+AD +M++G VIY+D  ++ LNKPAGL VQGGSG  +H+DG++
Sbjct: 67  LPAPGEITARPARARISDADREMLQGTVIYRDADILALNKPAGLPVQGGSGQERHIDGMA 126

Query: 122 AALQFDAEEKPRLVHRLDKDTSGVLVLARTRLAAQSLTAAFRHRATRKIYWALVAGVPTP 181
            ALQF+ +E PRLVHRLDKDTSGVL++ARTR +A +LTAAFR R TRKIYWA VAGVP P
Sbjct: 127 EALQFELDEPPRLVHRLDKDTSGVLLMARTRRSAAALTAAFRARQTRKIYWAAVAGVPQP 186

Query: 182 YLGEIKCGLVKAPGHGKSGEGEKMIAIHSNEVDSTPGAKRSHTHYATLYRVASRAAWVAM 241
            LG ++  L+KAPGHGK GEGEKM+ I   ++D+ P AKR+ T YA L  +  R AW  +
Sbjct: 187 QLGTVRYALMKAPGHGKRGEGEKMLCIDPRQMDAHPDAKRATTDYAVLSALGRRVAWCVL 246

Query: 242 EPITGRTHQLRAHMAEIGHPIAGDGKYGGSSQENLGDGWGAQLGGIISKKLHLHCRRMAF 301
            PITGRTHQLRAHMAE+GHPI GDGKYGGS QENLGDGWGAQLGG +SKKLHLH R ++ 
Sbjct: 247 VPITGRTHQLRAHMAELGHPIIGDGKYGGSGQENLGDGWGAQLGGEMSKKLHLHARHLSL 306

Query: 302 EHPTTKKPLSITAPLPDHMKDSWDTFGWSEDLAAEDPFESLQ 343
            HP T   LS+TAPLP HM  +W+  GW       DPFE+L+
Sbjct: 307 THPVTGAQLSLTAPLPPHMARTWEALGWDARDVPVDPFEALE 348