Pairwise Alignments

Query, 343 a.a., ribosomal large subunit pseudouridine synthase C from Phaeobacter inhibens DSM 17395

Subject, 344 a.a., RluA family pseudouridine synthase from Ralstonia sp. UNC404CL21Col

 Score =  146 bits (369), Expect = 7e-40
 Identities = 115/337 (34%), Positives = 173/337 (51%), Gaps = 29/337 (8%)

Query: 2   ITVSEDDADQRIDRWLRRLFPHVSQGRIEKMCRKGELRLDGGRVKANSRVAAGQVVRVPP 61
           + + ED   QRID +L R+   V +  I ++ R GE+R++ GR+ A  R+  G +VR+PP
Sbjct: 32  VEIGEDAEGQRIDNFLMRVAKGVPKSHIYRIVRSGEVRVNKGRIDAEYRLKLGDLVRIPP 91

Query: 62  LGASDLKPAEAPSYRISEADAKMIRGCVIYKDDAVIVLNKPAGLAVQGGSGTTKHVDGLS 121
           L  +  + AEAP   +  A+       ++++D  ++V++KPAG+AV GGSG    V  + 
Sbjct: 92  LRIA--QQAEAPR-AVPAAEF-----TILHEDTHLLVIDKPAGVAVHGGSGVAFGV--IE 141

Query: 122 AALQFDAEEK-PRLVHRLDKDTSGVLVLARTRLAAQSLTAAFRHRATRKIYWALVAGVPT 180
              Q   E K   LVHRLD++TSGVL+LA+ R A  +L    R     K Y+A V GV  
Sbjct: 142 QLRQSRPEAKFLELVHRLDRETSGVLLLAKKRSALVALHEQIREGQLDKRYFAAVKGV-W 200

Query: 181 PYLGEIKCGLVKAPGHG-KSGEGEKMIAIHSNEVDSTPGAKRSHTHYATLYRVASRAAWV 239
           P+    K   +K+P H   + EGE+ + + ++        + SHT +  +  V      +
Sbjct: 201 PH----KRQHIKSPLHKYTTPEGERRVRVQAD-------GQASHTIFNKV-GVFGPYTLL 248

Query: 240 AMEPITGRTHQLRAHMAEIGHPIAGDGKYGGSSQENLGDGWGAQLGGIISKKLHLHCRRM 299
             E  TGRTHQ+R H+A  G PI GD KYG  +   L              ++ LH  R+
Sbjct: 249 EAELKTGRTHQIRVHLAHAGCPILGDDKYGDFA---LNKALSRANASPRLARMFLHAHRL 305

Query: 300 AFEHPTTKKPLSITAPLPDHMKDSWDTF-GWSEDLAA 335
              HP + + ++ TAPLP    D  + F G   D AA
Sbjct: 306 QLTHPQSGEIVTFTAPLPAECADFLNAFQGPDSDAAA 342