Pairwise Alignments

Query, 405 a.a., major tail sheath protein from Phaeobacter inhibens DSM 17395

Subject, 480 a.a., tail protein from Herbaspirillum seropedicae SmR1

 Score =  161 bits (408), Expect = 3e-44
 Identities = 115/319 (36%), Positives = 161/319 (50%), Gaps = 28/319 (8%)

Query: 96  ADDTE-TLANMIGGVNATTGQFEGVHALLGAESVVGHAPRILCAPGWTHQRLEDSGNPGT 154
           AD T+ T A++IG V A+ GQ  G+ AL  + ++ G  P+IL AP +             
Sbjct: 169 ADATKVTPADVIGSVGAS-GQRLGMKALRDSYALFGFYPKILIAPVFAS----------- 216

Query: 155 YLANPVVAELEGIADRIGAVIIADGP-NTTDAAAQAYAGDWGT------SGRIYVVDPWV 207
            LA+ V AEL   A  + A+   D P   T   A    G  G+      S R+ +  P++
Sbjct: 217 -LAS-VSAELIATATALRAISFIDAPIGVTPQQAITGRGPAGSINFNTSSDRVGLCYPYL 274

Query: 208 KVL-GSDGTPVDQPASARVAGVIARTDNDRGFWVSPSNQGIFGIIGTSRPVDFKLGDKAS 266
           K    S G    +P S+  AG  +R D D G+W S SN  + G  G  RP+D  + D   
Sbjct: 275 KAFDASVGYDRLRPLSSFAAGAQSRKDQDNGYWWSLSNTELLGATGVERPIDAMINDPNC 334

Query: 267 RANLLNENDVATIIRQ--DGYRLWGNR---VPTADPKWQFLCVRRTADVLNESIQRAHMW 321
            ANLLN   V T+      G R+WGNR    P +     FLCVRR ADV+ ES++   + 
Sbjct: 335 EANLLNAAGVITVFNSFGTGLRIWGNRSAAFPASTHPKNFLCVRRVADVIAESLEYFTLQ 394

Query: 322 AVDRAITKTYMDDVVEGVNGFIATLIAQGALLGGSCWADPDLNTPTSIQNGQVWFNFDFT 381
             DR +    +DDVVE  N F+  L A GA++ G  W DP  N PT +  G +   +DF 
Sbjct: 395 YSDRPLDNALVDDVVESGNRFLRKLKADGAIIDGRAWYDPAQNDPTELAAGHLTITYDFM 454

Query: 382 PPYPAERVTFRSHLTNEYI 400
           PP PAERV++R+ +  +Y+
Sbjct: 455 PPTPAERVSYRASINIDYL 473



 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 10/127 (7%)

Query: 2   SGFLHGVEVLEIDTGPRPIRTISTGVIGIVGTAPAADADAFPLNTPVLIAGSRSEAAKLD 61
           + +LHGVE +EID GPRP++ + T VIGIVGTA A      P+NTP+L++  R  A    
Sbjct: 3   ASYLHGVETIEIDKGPRPVQLVKTAVIGIVGTAAAG-----PVNTPILVSNERDFA---- 53

Query: 62  MTADGTGGGTLPGALDGIFDQIGAVVIAVRVEEGADDTETLANMIGGVNATTGQFEGVHA 121
              +   G T+  AL  I+ Q G V + V V + A    ++ + +  V A  G F     
Sbjct: 54  QFGEDIAGSTILDALQHIYQQKGTVCVVVNVLDPAIHKTSVVDEVVNV-AADGSFRTSRP 112

Query: 122 LLGAESV 128
            + A S+
Sbjct: 113 AIAAVSI 119