Pairwise Alignments

Query, 335 a.a., phage late control gene D protein (GPD) from Phaeobacter inhibens DSM 17395

Subject, 338 a.a., bacteriophage regulatory protein from Herbaspirillum seropedicae SmR1

 Score = 87.8 bits (216), Expect = 4e-22
 Identities = 86/329 (26%), Positives = 152/329 (46%), Gaps = 25/329 (7%)

Query: 12  VEVDGKDISSTLAPRLISLSLTDAAGVQSDNVQITLSDT-TLFGRLAEPKAGAEIRVWLG 70
           V  + +DIS+ ++P L+ +S TD    QSD +++ L D    + R   P+ G  + V LG
Sbjct: 10  VRYERRDISANISPSLLEISYTDFLEGQSDTIELVLEDADRRWQRAWYPQHGDLLEVQLG 69

Query: 71  YPF-QLKYMGLFIADNVIVGGPPDQMTITGIASVNGETSSGKTALTDQKKRSWPSGTTIS 129
           Y    L   G F  D V + GPPD + I  +A+  G T     AL  +  R++    T++
Sbjct: 70  YEAGALLPCGQFEIDEVELDGPPDVVRIKALAA--GVT----RALRTRNDRAY-ENITLA 122

Query: 130 ALVQKIAGEHGLEHAVSESLAKVALSHIDQIDESDINLLSRIARDHDAIAKPGNGRLIMA 189
            L   +A  +G++  VS  +A V L  + Q++E+D+  L R+A ++       +G++ + 
Sbjct: 123 ELANTVARRNGMQ--VSGQIAPVRLERVTQVNETDLAFLKRVAAEYGYSFSVRHGKICLF 180

Query: 190 KRGESLTASGAPMPVLSITPKKISRWQYQNSTREKAGSVVAVYQD----HGKGKSVECIA 245
            R E   +     P L I    +S +++++  +    +    Y D      + + VE  A
Sbjct: 181 ARAELRQSK----PELVIERGDVSSYRFRDKIQGVVKAATVSYHDGRQQQVRRQRVEASA 236

Query: 246 GEGEPKQ----RLKRRFPNKDAAEQAAASELQRLKRAGRGLSVTMPGDPDAMAEAKLSAA 301
             G  +     +L  R  N   A+  A + L   +      S+T+ G+   MA   +   
Sbjct: 237 DSGARQSADELKLNLRAENAQQAKLKADAALAHSQDDQTSASLTLFGNVRLMAGVNVQLR 296

Query: 302 GFRSYVDGEWLITKAEHSLD-SGGYRTAI 329
           GF   +DG++ I ++ H +  S GY + I
Sbjct: 297 GF-GRMDGKYGIAQSLHRITRSDGYSSQI 324