Pairwise Alignments

Query, 180 a.a., Integral membrane protein CcmA involved in cell shape determination from Phaeobacter inhibens DSM 17395

Subject, 147 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 51.2 bits (121), Expect = 8e-12
 Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 10/136 (7%)

Query: 42  AKPPASVLSSDLHITGNLKTTGDIQVEGTVEGDIRAHLLTIGE-SATIKGEVTADDVVIN 100
           A P  S ++    +TGN++ TGD+ + G V+G I +    I E +  +  EV   +++I+
Sbjct: 12  ASPALSFIAEGTKLTGNMEFTGDVLIGGEVQGQILSQANVIVERTGKLHSEVKCRELIID 71

Query: 101 GRIVGRVRGLKVRLTSTARVEGDIIHKTIAIESGAHFEGSVQRQDDPLNPGKAAAPRAAA 160
           G   GR+   ++ +     V+GD+   ++ I  G  F G   ++D             A 
Sbjct: 72  GYFKGRLICERLVIQGHGIVDGDVACTSMQISEGGQFIGLRIKEDH--------QTIHAH 123

Query: 161 PAPAP-SAAVTAATAA 175
           P P+P SA V  +T+A
Sbjct: 124 PLPSPGSANVLLSTSA 139