Pairwise Alignments

Query, 283 a.a., binding protein-dependent transport system, inner membrane component from Phaeobacter inhibens DSM 17395

Subject, 280 a.a., sugar ABC transporter permease from Pseudomonas fluorescens FW300-N2E3

 Score =  168 bits (426), Expect = 1e-46
 Identities = 94/272 (34%), Positives = 149/272 (54%), Gaps = 4/272 (1%)

Query: 14  LAFGKYAAIAFYLGFALFPLYWLMKIAITPDALIFSEGTRMLPSAVTFENFATVLFETEF 73
           L  G +  I   L +A+FP Y+ +  ++ P + +F     +   +  F N+A VL ++ F
Sbjct: 11  LRLGFWCLIGILLLYAVFPFYYAIVTSLKPSSALFEVSYWI--DSPDFSNYAAVLHQSSF 68

Query: 74  LAYFRNSLTVSLGTAFFTTLIAAGAGYAFSRFVFAGKRIIIAVMLITQMFPLLMIIAPIY 133
           L    NSL V+L        ++  A YA  R  F G+  ++ ++L   MFP + +++ ++
Sbjct: 69  LRAIGNSLVVALCVVTLALFLSLTAAYALGRVKFRGRGTVLMMVLGVSMFPQVAVLSGLF 128

Query: 134 KIVADLGLLNSLTSLIVVYTAFNIPFATFLMQSFFDGIPKDLEEAAMMDGCSRFQALRTV 193
           +++  LGL N+  +LI+ YT F +PF  +++ +F   +P +LEEAA+MDG S +  L  V
Sbjct: 129 EVIRALGLYNTSWALILSYTIFTLPFTVWVLTTFMGQLPHELEEAAIMDGASPWVTLTRV 188

Query: 194 VFPLTLPGLGATLGFVFTAAWSELLFALMLISKNDAMTFPV--GLLTFVSKFSVDWGQMM 251
           + PL  P L  T    F AAW+E LFAL     +   T PV   L++  S   + WG +M
Sbjct: 189 LLPLLWPALVTTGLLAFIAAWNEFLFALTFTLTDTQRTVPVAIALISGGSPHELPWGLLM 248

Query: 252 AAGVLALVPSCLFFIFIQRYLVQGLTSGAVKG 283
           AA VL  VP  +  +  QR +V GLT+GA+KG
Sbjct: 249 AASVLVTVPLVILVLIFQRRIVSGLTAGALKG 280