Pairwise Alignments

Query, 283 a.a., binding protein-dependent transport system, inner membrane component from Phaeobacter inhibens DSM 17395

Subject, 300 a.a., sugar ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  160 bits (406), Expect = 2e-44
 Identities = 90/266 (33%), Positives = 141/266 (53%), Gaps = 3/266 (1%)

Query: 19  YAAIAFYLGFALFPLYWLMKIAITPDALIFSEGTRMLPSA--VTFENFATVLFETEFLAY 76
           +  +  Y   ALFP+  ++  ++     IF EG   LP+A  +TF  F  VL  T FL Y
Sbjct: 36  HTVLCLYAVIALFPIALILINSVKTRNAIF-EGPMALPTAETLTFAGFQKVLAGTHFLLY 94

Query: 77  FRNSLTVSLGTAFFTTLIAAGAGYAFSRFVFAGKRIIIAVMLITQMFPLLMIIAPIYKIV 136
           F NSL V++   F   L  A A +A + + F G R +   + I  M P+ +    I ++V
Sbjct: 95  FGNSLAVTVAALFLIVLFGAMAAWALTEYRFFGNRALNFFIAIGIMIPIRLGTVSILQLV 154

Query: 137 ADLGLLNSLTSLIVVYTAFNIPFATFLMQSFFDGIPKDLEEAAMMDGCSRFQALRTVVFP 196
             L L+N+ T+L++VYTA  +P A  ++  F   IP +L++AA  DG         V+ P
Sbjct: 155 VALDLINTRTALVLVYTAQGLPLAVMILSEFMRQIPGELKDAARCDGVGELSIFFRVILP 214

Query: 197 LTLPGLGATLGFVFTAAWSELLFALMLISKNDAMTFPVGLLTFVSKFSVDWGQMMAAGVL 256
           L  P +     F    AW++L F L+L    D  T  +G+  F+ +++ DW  ++AA  +
Sbjct: 215 LLRPAIATVAVFTMIPAWNDLWFPLILAPGEDTRTVTLGVQQFIGQYATDWNSVLAALSM 274

Query: 257 ALVPSCLFFIFIQRYLVQGLTSGAVK 282
           A++P  L ++   R L++GLTSGAVK
Sbjct: 275 AVIPVLLLYMAFSRQLIRGLTSGAVK 300