Pairwise Alignments

Query, 232 a.a., ribosomal large subunit pseudouridine synthase E from Phaeobacter inhibens DSM 17395

Subject, 209 a.a., pseudouridine synthase from Pseudomonas stutzeri RCH2

 Score =  246 bits (629), Expect = 2e-70
 Identities = 121/182 (66%), Positives = 144/182 (79%), Gaps = 5/182 (2%)

Query: 3   RLIRFNKPYDVLPQFTDRGSDSSPRATLSDWIDLPGVYPAGRLDRDSEGLMLLTDHGRLQ 62
           RL+  NKP+DVL QF    +D+  RATL D++D+PGVYPAGRLDRDSEGL+LLT+ G+LQ
Sbjct: 31  RLLLLNKPFDVLTQF----NDADGRATLKDFVDVPGVYPAGRLDRDSEGLLLLTNDGQLQ 86

Query: 63  AWISDPQHKMPKTYWVQVEGTPDAAAIQALANGVELKDGMTRPAKAALIEEPEGIWARNP 122
           A I+DP+HK+PKTYWVQVEG   A  +Q L +GVEL DGMT PA+A  +EEPE +W RNP
Sbjct: 87  ARIADPKHKLPKTYWVQVEGEVSAEQLQRLRDGVELNDGMTLPAEARQLEEPE-LWPRNP 145

Query: 123 PIRVRKSVPDSWIALTIREGRNRQVRRMTAAVGHPTLRLIRAAIGIWTLDGLSPGTWEDL 182
           P+R RKSVP SW+ L IREGRNRQVRRMTAAVG PTLRL+R  IG WTL GL PG W ++
Sbjct: 146 PVRFRKSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGPWTLGGLQPGEWREV 205

Query: 183 EA 184
            A
Sbjct: 206 PA 207