Pairwise Alignments

Query, 232 a.a., ribosomal large subunit pseudouridine synthase E from Phaeobacter inhibens DSM 17395

Subject, 212 a.a., Pseudouridine synthase from Azospirillum brasilense Sp245

 Score =  239 bits (611), Expect = 2e-68
 Identities = 121/210 (57%), Positives = 148/210 (70%), Gaps = 7/210 (3%)

Query: 3   RLIRFNKPYDVLPQFTDRGSDSSPRATLSDWIDLPGVYPAGRLDRDSEGLMLLTDHGRLQ 62
           RLI  NKPY VLPQFTD       R TL+D + + GVY AGRLDRDSEGL+ L+D G L 
Sbjct: 3   RLILLNKPYGVLPQFTDEQG----RPTLADHVPVKGVYAAGRLDRDSEGLLALSDDGALI 58

Query: 63  AWISDPQHKMPKTYWVQVEGTPDAAAIQALANGVELKDGMTRPAKAALIEEPEGIWARNP 122
           A I+ P+HK+PKTYWVQVEG P   A+Q L +GV L DG T PA+A  +EEP+ +W R+P
Sbjct: 59  ARIASPKHKLPKTYWVQVEGVPTEEALQRLRDGVTLNDGPTLPAEARRMEEPDSLWPRDP 118

Query: 123 PIRVRKSVPDSWIALTIREGRNRQVRRMTAAVGHPTLRLIRAAIGIWTLDGLSPGTWEDL 182
           P+R R ++P SWIALT++EGRNRQVRRMTAAVG PTLRLIR +IG WTLDGL PG W ++
Sbjct: 119 PVRFRAAIPTSWIALTLKEGRNRQVRRMTAAVGFPTLRLIRWSIGDWTLDGLVPGQWREV 178

Query: 183 EAPTIPGPPKPKPAPNRQAIARRKAAASKP 212
              T+PG   PK + +R         A +P
Sbjct: 179 ---TVPGRETPKASLHRPKAPPGNTKAKRP 205