Pairwise Alignments

Query, 232 a.a., ribosomal large subunit pseudouridine synthase E from Phaeobacter inhibens DSM 17395

Subject, 212 a.a., pseudouridylate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  211 bits (537), Expect = 9e-60
 Identities = 108/187 (57%), Positives = 135/187 (72%), Gaps = 5/187 (2%)

Query: 1   MTRLIRFNKPYDVLPQFTDRGSDSSPRATLSDWIDLPGVYPAGRLDRDSEGLMLLTDHGR 60
           +T+L+ FNKP+DVL QFTD       R TL D+I LPGVY AGRLDRDSEGL+LLT+ G+
Sbjct: 20  VTQLVLFNKPFDVLCQFTDEAG----RQTLKDFIPLPGVYAAGRLDRDSEGLLLLTNDGQ 75

Query: 61  LQAWISDPQHKMPKTYWVQVEGTPDAAAIQALANGVELKDGMTRPAKAALIEEPEGIWAR 120
           LQ+ +++P+ +  KTYWVQVEG PD +A+  L  GVELKDG T PA+   I+ P+ IW R
Sbjct: 76  LQSRLTEPKKQTYKTYWVQVEGIPDESALDKLREGVELKDGPTLPARVRRIDAPQ-IWPR 134

Query: 121 NPPIRVRKSVPDSWIALTIREGRNRQVRRMTAAVGHPTLRLIRAAIGIWTLDGLSPGTWE 180
           NPP+R RKS+PD W+ + I EGRNRQVRRMTA +G+PTLRL+RAAIG   L  L  G + 
Sbjct: 135 NPPVRERKSIPDCWLEIQICEGRNRQVRRMTAHIGYPTLRLVRAAIGEIRLGHLGSGEYR 194

Query: 181 DLEAPTI 187
            L    I
Sbjct: 195 KLNRDEI 201