Pairwise Alignments

Query, 355 a.a., protein recA (recombinase A) from Phaeobacter inhibens DSM 17395

Subject, 352 a.a., recombinase RecA from Pseudomonas fluorescens SBW25-INTG

 Score =  457 bits (1176), Expect = e-133
 Identities = 231/329 (70%), Positives = 275/329 (83%), Gaps = 6/329 (1%)

Query: 7   MKDNKKSGDKQKALDSALAQIERQFGKGSIMKLGDGNPLNEIEASSTGSLGLDIALGIGG 66
           M DNKK     KAL +AL QIERQFGKG++M++GD +    I A STGSLGLDIALGIGG
Sbjct: 1   MDDNKK-----KALAAALGQIERQFGKGAVMRMGD-HDRQAIPAISTGSLGLDIALGIGG 54

Query: 67  LPMGRIVEIYGPESSGKTTLTLHCIAEQQKKGGVCAFVDAEHALDPQYAAKLGVDLDELL 126
           LP GRIVEIYGPESSGKTTLTL  IA+ QK G  CAFVDAEHALDP+YA KLGV++D+LL
Sbjct: 55  LPKGRIVEIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLL 114

Query: 127 ISQPDTGEQALEITDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSSVGVQARLMSQAM 186
           +SQPDTGEQALEITD LVRS A+++++VDSVAAL PK+E+EG+MGD  VG+QARLMSQA+
Sbjct: 115 VSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQAL 174

Query: 187 RKLTGSISRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGAIKDRD 246
           RK+TG+I  +NC+VIFINQIRMKIGVMFGSPETTTGGNALKFY+SVRLDIRR GA+K+ D
Sbjct: 175 RKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGD 234

Query: 247 EVVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKMGELLDLGVAAGVVAKSGAWFSYGD 306
           EVVG+ TRVKVVKNKVAPPF+Q EF I+YG+GI   GE++DLGV  G V KSGAW++Y  
Sbjct: 235 EVVGSETRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNG 294

Query: 307 ERIGQGRENAKTYLRENAHIAYDIEDKIR 335
            +IGQG+ N+  +L +N  IA  +E +IR
Sbjct: 295 SKIGQGKANSAKFLADNPDIAATLEKQIR 323