Pairwise Alignments

Query, 355 a.a., protein recA (recombinase A) from Phaeobacter inhibens DSM 17395

Subject, 353 a.a., recombinase A (RefSeq) from Shewanella loihica PV-4

 Score =  455 bits (1171), Expect = e-133
 Identities = 227/326 (69%), Positives = 273/326 (83%), Gaps = 1/326 (0%)

Query: 11  KKSGDKQKALDSALAQIERQFGKGSIMKLGDGNPLNEIEASSTGSLGLDIALGIGGLPMG 70
           K   +K+KAL + L QIE+QFGKGSIMKLG+   + ++E  STGSL LD+ALG GGLP+G
Sbjct: 2   KIDANKEKALSAVLGQIEKQFGKGSIMKLGENRSM-DVETISTGSLSLDVALGAGGLPLG 60

Query: 71  RIVEIYGPESSGKTTLTLHCIAEQQKKGGVCAFVDAEHALDPQYAAKLGVDLDELLISQP 130
           RIVEIYGPESSGKTTLTL  IA  Q++G VCAF+DAEHALDP YA KLGVD+D LL SQP
Sbjct: 61  RIVEIYGPESSGKTTLTLEVIAAAQREGKVCAFIDAEHALDPIYAQKLGVDIDNLLCSQP 120

Query: 131 DTGEQALEITDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSSVGVQARLMSQAMRKLT 190
           DTGEQALEI D L RSGAV+++IVDSVAALTPK+E+EG++GDS +G+ AR+MSQAMRKL 
Sbjct: 121 DTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA 180

Query: 191 GSISRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGAIKDRDEVVG 250
           G++ +SN ++IFINQIRMKIGVMFG+PETTTGGNALKFY+SVRLDIRR GAIKDR+EV+G
Sbjct: 181 GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDREEVIG 240

Query: 251 NATRVKVVKNKVAPPFKQVEFDIMYGEGISKMGELLDLGVAAGVVAKSGAWFSYGDERIG 310
           N TRVKVVKNK+A PFKQ EF I+YGEGI++ GEL+DLGV   ++ KSGAW+SY  ++IG
Sbjct: 241 NETRVKVVKNKIAAPFKQAEFQILYGEGINRTGELVDLGVMHKLIEKSGAWYSYKGDKIG 300

Query: 311 QGRENAKTYLRENAHIAYDIEDKIRA 336
           QGR NA  YL EN  I  +I+  +RA
Sbjct: 301 QGRANAGKYLVENPEIGAEIDQALRA 326