Pairwise Alignments

Query, 355 a.a., protein recA (recombinase A) from Phaeobacter inhibens DSM 17395

Subject, 358 a.a., recombinase RecA from Burkholderia phytofirmans PsJN

 Score =  484 bits (1245), Expect = e-141
 Identities = 237/339 (69%), Positives = 293/339 (86%), Gaps = 5/339 (1%)

Query: 7   MKDNKK-----SGDKQKALDSALAQIERQFGKGSIMKLGDGNPLNEIEASSTGSLGLDIA 61
           M+++KK     + +K KAL +ALAQIE+QFGKGS+M+LG G  + +I+  STGSLGLDIA
Sbjct: 1   MEESKKGSAGLTAEKSKALAAALAQIEKQFGKGSVMRLGAGEAVEDIQVVSTGSLGLDIA 60

Query: 62  LGIGGLPMGRIVEIYGPESSGKTTLTLHCIAEQQKKGGVCAFVDAEHALDPQYAAKLGVD 121
           LG+GGLP GR+VEIYGPESSGKTTLTL  +AE QK GG  AF+DAEHALD QYA KLGV+
Sbjct: 61  LGVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTAAFIDAEHALDIQYAGKLGVN 120

Query: 122 LDELLISQPDTGEQALEITDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSSVGVQARL 181
           ++ELL+SQPDTGEQALEI D LVRSG+++M+++DSVAAL PK+E+EG+MGDS  G+QARL
Sbjct: 121 VNELLVSQPDTGEQALEIADALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARL 180

Query: 182 MSQAMRKLTGSISRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGA 241
           MSQA+RKLTG+I R+NC+VIFINQIRMKIGVMFG+PETTTGGNALKFY+SVRLDIRRIG+
Sbjct: 181 MSQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGS 240

Query: 242 IKDRDEVVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKMGELLDLGVAAGVVAKSGAW 301
           IK  DEV+GN TRVKVVKNKVAPPF++  FDI+YGEGIS+ GE++DLGV A +V K+GAW
Sbjct: 241 IKKNDEVIGNETRVKVVKNKVAPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAW 300

Query: 302 FSYGDERIGQGRENAKTYLRENAHIAYDIEDKIRAAHGL 340
           +SY  ERIGQG++NA+ +LREN  IA +IE++IR + G+
Sbjct: 301 YSYSGERIGQGKDNAREFLRENPDIAREIENRIRESLGV 339