Pairwise Alignments

Query, 470 a.a., nitrogen regulation protein NtrC from Phaeobacter inhibens DSM 17395

Subject, 469 a.a., nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) from Shewanella loihica PV-4

 Score =  208 bits (530), Expect = 3e-58
 Identities = 147/494 (29%), Positives = 246/494 (49%), Gaps = 57/494 (11%)

Query: 1   MDGTVLVADDDRTIRTVLTQALTRAGCKVHATSSLTTLMRWVGEGKGDVVISDVMMPDGN 60
           M   V V DDD +IR V+ +AL  A     + ++  +L + + + +  V+ISD+ MP  +
Sbjct: 1   MTEKVWVLDDDSSIRWVVERALKGAKISCASFAAAESLWQALEQTQPQVIISDIRMPGTD 60

Query: 61  GLEMLPKIADDRPGLPVIVISAQNTIMTAIKAAEAEAYDYLPKPFDLPELMKRTAKALTE 120
           GL +L ++    P +PVI+++A + + +A+ A +A A++YLPKPFD+ E +    +AL+ 
Sbjct: 61  GLTLLDRLQLHYPHIPVIIMTAHSDLDSAVSAYQAGAFEYLPKPFDIDEAIGLVERALSH 120

Query: 121 RRSGPGALRAATQAGGPAGGAETAGESHEDLPLVGRTEVMQTLYRLIARVMNTDIPLLIT 180
            +     + +  +   P               ++G    MQ ++R I R+  + I +LI 
Sbjct: 121 AKEQSPKVISQPEVKAP--------------EIIGEAPAMQEVFRAIGRLSRSSISVLIN 166

Query: 181 GESGTGKSLIARSMHDLSDRRTLPFVRAEAA--------------DLASLEGPAQL---- 222
           G+SGTGK L+A ++H  S R+  PF+    A              +  +  G A +    
Sbjct: 167 GQSGTGKELVAGALHKHSPRKDKPFIALNMAAIPKELIESELFGHEKGAFTGAANVRQGR 226

Query: 223 LAEVRGGTLLLDELADLSEEAQARVVRMMD-----APGDHQP-----RFIATSQQDLTAA 272
             +  GGTL LDE+ D+  + Q R++R++        G H P     R IA + Q+L + 
Sbjct: 227 FEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRIGGHSPVQVDVRIIAATHQNLESL 286

Query: 273 MEAGGLRQDLYYRISGTELPVPALRARVDDISLLCAHFLTRAENE-GAPHRRLSEAAREP 331
           +  G  R+DL++R++   + +P L  R +DI  L  HFL  A  E     + L++A  + 
Sbjct: 287 VAKGDFREDLFHRLNVIRVHLPPLSQRREDIPQLARHFLATAAKEISVEPKILTKATADT 346

Query: 332 LRQFPWPGNVRQLENVVRRLALTARSEEISLDEVNAALGAQSG---GEPMAATGSTLSSE 388
           L   PWPGNVRQLEN  R L + A  +EI   ++   L   S      P A +G     E
Sbjct: 347 LASLPWPGNVRQLENTCRWLMVMASGQEILPQDLPPELLTPSNSHDSSPQAGSGGW--QE 404

Query: 389 KLSESVARHLQRYFDLHGDMLPPPGLYARLMREVETPLIEISLAMTGGNQAKCADLLGIN 448
            L++ +    QR  +   D+L       ++    E  L+E +L  T G++ + A  LG  
Sbjct: 405 ALTQWID---QRLSEGESDLL------TQIQPAFEKILLETALKHTKGHKQEAAKRLGWG 455

Query: 449 RNTLRKKITDLDIE 462
           RNTL +K+ +L+++
Sbjct: 456 RNTLTRKLKELEMD 469