Pairwise Alignments

Query, 291 a.a., putative glutamyl-tRNA synthetase from Phaeobacter inhibens DSM 17395

Subject, 365 a.a., tRNA glutamyl-Q(34) synthetase GluQRS from Bifidobacterium breve UCC2003

 Score =  142 bits (357), Expect = 1e-38
 Identities = 104/313 (33%), Positives = 147/313 (46%), Gaps = 50/313 (15%)

Query: 6   RFAPSPTGPLHLGHAYSALLAHDMAQANGGRFLLRIEDIDTARSRPHWEQQIYEDLTWLG 65
           RFAP+P+G +H+G+ Y+ L A   A++ G R L+RIED+D  R     ++ + +DL WLG
Sbjct: 4   RFAPTPSGRMHIGNVYAMLAAWLSARSRGDRMLMRIEDVDKPRVIAGADRLMLDDLRWLG 63

Query: 66  LNWPQPVMRQSQRLPRYRATLDQLTAMGLTYPCRCNRRDIEAAAGAPQEGVPQFGPDG-R 124
           L+W    + QSQR  RY   L+ L + G+ YPC C+R DI AA+ AP EG      DG  
Sbjct: 64  LDWDGEPIFQSQRTERYEYALECLRSRGVLYPCFCSRADIRAAS-APNEG------DGFM 116

Query: 125 IYPGTCRN---------RPMAEAGAEDVIRLNME-----SAVNAARLRPFTETGETYNGQ 170
           +YPGTCR+               G +  +R+ M      S    A L   +E      G 
Sbjct: 117 VYPGTCRHLLRNHSGEVHSRLARGDQHSVRIAMPEPRAMSDGPFANLYTSSEASTPVRGD 176

Query: 171 HPMDA-------------RRLITTVGDIILVRRGMGSAYHLSVVVDDADQHITHVVRGAD 217
              D                L   VGD ++ R      Y L VVVDD D  +  +VRG D
Sbjct: 177 GIADCITSFDDCVYGPQHYDLPHEVGDSVIRRADGLFGYQLVVVVDDLDMGVDDIVRGRD 236

Query: 218 LFEATQIHVLLQ---------------ALLGLPTPTYHHHNLIRDEQGKRLAKRDDARAI 262
           L  +T + + ++               A +    P Y H  LI +  G+RLAKR+ +  +
Sbjct: 237 LLRSTALQMWIRQCLLAGGFRPECASDARVSAEHPKYVHLPLIDNAAGRRLAKRERSLDM 296

Query: 263 AKYRAEGATPQDI 275
              RA G TP+ I
Sbjct: 297 GALRARGVTPEQI 309