Pairwise Alignments

Query, 353 a.a., Novel Xylose regulator from LacI family (from data) from Phaeobacter inhibens DSM 17395

Subject, 360 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  107 bits (266), Expect = 6e-28
 Identities = 95/340 (27%), Positives = 145/340 (42%), Gaps = 36/340 (10%)

Query: 1   MGKPTLHDVAAAAGVSYATADRVLNNRGGVAKKSQDRVRAAIADLGYQRDITAANLSRRR 60
           + KP   D+A  AGV  AT +RVLN RGGV  +  ++V  A   L Y R +  A+   R 
Sbjct: 28  VSKPNYRDIARHAGVGTATVERVLNGRGGVRPELVEKVVVAARALNYPRTLPDAH---RG 84

Query: 61  RYRFAVLMPAAQEGFFATLHADLEQ--------EVAARSQARQQITLTQVPPFDAAALTC 112
             R  VL+   +  F+  L    E+         V  RS A +      + P + A    
Sbjct: 85  LLRIEVLLVRPETTFYRRLSKAFERIADTLDPLVVVHRSFAEE------MKPEEIARRIL 138

Query: 113 ALEACAAEGYDGVCLVAVQDPSVDAALTGLRAQGVAVVTLVADSAAQARDTYVGIDNRRA 172
           + +   A    G+ L     P + AA+  +  +G+ VV +V  ++   +  +VGIDN  A
Sbjct: 139 SADLTRA----GLILAVPSSPVISAAVEAVVERGLPVVHVVTRASVD-KGEFVGIDNYAA 193

Query: 173 GRTAGDLMRLAHRGSAASLGQILPITGSLNARDHADRYAGFCDVVSADLHILPPLE---- 228
           GRTA   +    R    ++G   PI      + H DR  GF D          P+     
Sbjct: 194 GRTAAHFIARMARAEGPAVGLCHPIY-----QVHRDRIRGFSDYFRDKPG---PIAFDWL 245

Query: 229 --TGDDPEILEQALRRTLRANPNITGIYNLGAGIPGLISALAAIQPDDRPVVISHELCPA 286
             T D+     + L   L   PN+ G+YN G     LI  L   +     + + HEL   
Sbjct: 246 GFTRDEEHYSAETLSTALEIYPNLVGLYNAGGANSALIDVLRRHRRGRDVLFVGHELTEY 305

Query: 287 TRDAVAHGLIDAVIDQKPAQEITAALAALVALSDGQSVDP 326
           TR A+  G++D V+DQ P  +   AL  ++      +++P
Sbjct: 306 TRAALREGIMDVVLDQAPEAQAQRALDLILRRIGLTAIEP 345