Pairwise Alignments

Query, 353 a.a., Novel Xylose regulator from LacI family (from data) from Phaeobacter inhibens DSM 17395

Subject, 337 a.a., LacI family transcription regulator (RefSeq) from Shewanella amazonensis SB2B

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 21/230 (9%)

Query: 3   KPTLHDVAAAAGVSYATADRVLNNRGGVAKKSQDRVRAAIADLGYQRDITAANLSRRRRY 62
           K T++DVA  AGVS  T  RV NN   V + + D+V  AI  L YQ ++ A NL+  + Y
Sbjct: 2   KVTINDVAKYAGVSIKTVSRVTNNEPSVKQATIDKVNEAIKALNYQPNLAARNLAGTKSY 61

Query: 63  RFAVLMPAAQEGFFATLHADLEQEVAARSQARQQITLTQVPPFDAAALTCALEACAAEGY 122
               +       +       ++ +    S  R +     + P DA A +   E  A   +
Sbjct: 62  VIGFIYDNPNAYYI------IDMQNGILSACRDKGYELLIHPCDATADSICEELTALVKH 115

Query: 123 DGVCLVAV-----QDPSVDAALTGLRAQGVAVVTLVADSAAQARDTYVGIDNRR-AGRTA 176
             +  + +     +DP + AAL  + A  V ++    D   ++    V +++R  A    
Sbjct: 116 ARLAGLVLTPPLSEDPKILAALDSIEAHYVRII--AGDKTKESCGLTVLVNDRHGAVSIT 173

Query: 177 GDLMRLAHRGSAASLGQILPITGSLNARDHADRYAGFCDVVSADLHILPP 226
             L+ L H+        I  I+G        +R+AGFCD +S +   L P
Sbjct: 174 QHLIDLGHK-------HIAFISGDEQHESTKERFAGFCDALSLNNITLNP 216