Pairwise Alignments
Query, 523 a.a., D-alanine--poly(phosphoribitol) ligase subunit from Phaeobacter inhibens DSM 17395
Subject, 5469 a.a., Amino acid adenylation from Pseudomonas syringae pv. syringae B728a
Score = 166 bits (419), Expect = 3e-44
Identities = 146/501 (29%), Positives = 221/501 (44%), Gaps = 25/501 (4%)
Query: 1 MFETFIADLRETLLSQLDRPALITSEEVISFGSLAGRVEGILRALDDMPPGLSLIVGHKE 60
+FE + + E + D AL +E + A R+ L L P I+ +
Sbjct: 2720 LFEAQVRNNPEACAAIHDGVALSYTE----LNTRANRLARHLLGLGVQPGDSVAILLERS 2775
Query: 61 PDCIAAMIACAIAGRAFAFADRSTPMDRLEQIASTAGASHILAFGQETLPGGLPVQTLKE 120
D +A+ +A + D + P++R + + AS +L Q +L L
Sbjct: 2776 HDLLASQLAVLKCAAVYVPLDVNAPVERQAFMIEDSQASVLLTLSQMSLTTSTQRVDLDR 2835
Query: 121 LPTR-TPQLELKTALSEEGTFYVIFTSGSTGTPKGV--PISRGNYMALHRWYTPLLGAVR 177
L +L A S E Y+++TSGSTGTPKGV P + + ++ Y R
Sbjct: 2836 LMLNGLDNDDLALAQSSESVAYIMYTSGSTGTPKGVLVPHRAISRLVINNGYADFNAQDR 2895
Query: 178 PEGAHVNHASMAFDMGMFDLWPTLSLGRPVHLLNHANNIMPRNNIRHLTRVDVASPASWA 237
A ++ AFD D+W L G V ++ + + P N R L V W
Sbjct: 2896 VAFA----SNPAFDASTLDVWAPLLNGGCVVVIGQHDLLSPLNFQRLLLEQSVT--VLWM 2949
Query: 238 STPSLLQLMCTDPQFTAENLPDLRFFVVGGEMLPGALVQELQTRFPQAQVLNGYGPSEAT 297
+ Q E LR+ +VGG++L A++ + +LNGYGP+EAT
Sbjct: 2950 TAGLFHQYASG----LGEAFSRLRYLIVGGDVLDPAVIARVLANNAPQHLLNGYGPTEAT 3005
Query: 298 CATHLYPISVADAAADGPMKIGCAVGENRMQIIDADGEDVPAGEEGELVLSGPQVISHYL 357
+ Y I D +G + IG VG R+ ++D+ G VP G GEL + G V YL
Sbjct: 3006 TFSATYEIVSVD---NGSIPIGKPVGNTRLYVLDSQGLPVPLGVPGELYIGGQGVAKGYL 3062
Query: 358 PQDHPANAAL-----SQESGINTYRTGDLARLDVDGNLILLGRIDRQVKLLGNRIELNEI 412
+D + S++ YRTGDL R DGNL LGR D QVK+ G R+EL EI
Sbjct: 3063 NRDELSATQFVVDLFSEQIDALMYRTGDLVRWRADGNLEYLGRNDDQVKIRGFRVELGEI 3122
Query: 413 ERIAEGYSAVRKAVCLPQKDAAGRVTGLQLFVEPLAGATCERDGLFAHMGKHLSAQVLPR 472
E ++ VR+AV L ++D G + + + + L H+ L ++P
Sbjct: 3123 EARLAEHADVREAVVLCRQDVPGDKRLVAYVTAQQSENALDIEHLRNHLQGTLPDYMVPA 3182
Query: 473 DLRIVSAFPVTSNGKLDTRIL 493
+ A P+T+NGKLD + L
Sbjct: 3183 AYVQLDALPLTANGKLDRKAL 3203
Score = 159 bits (402), Expect = 3e-42
Identities = 148/499 (29%), Positives = 222/499 (44%), Gaps = 37/499 (7%)
Query: 18 DRPALITSEEVISFGSLAGRVEGI---LRALDDMPPGLSLIVGHKEPDCIAAMIACAIAG 74
D AL+ + +S+G L R + L AL I ++P I ++ +G
Sbjct: 3805 DAVALVFEAQTLSYGELNARANQVAHRLLALGVRADDRVAICVERDPAMIIGLLGILKSG 3864
Query: 75 RAFAFADRSTPMDRLEQIASTAGASHILAF-GQETLPGGLPVQT----------LKELPT 123
+ D + P +RL A T G S +A Q+++ LPV L++
Sbjct: 3865 AGYVPLDPAYPPERL---AYTLGDSTPVALLSQQSVQQALPVSQVPVIYLDDAGLQDESV 3921
Query: 124 RTPQLELKTALSEEGTFYVIFTSGSTGTPKGVPISRGNYMALHRWYTPLLGAVRPEGAHV 183
PQ+ +K + YVI+TSGSTG PKGV + N L G + +
Sbjct: 3922 DNPQISVKP----DDLAYVIYTSGSTGLPKGVMVEHRNVARLFSATEDWFGFNEQDVWAL 3977
Query: 184 NHASMAFDMGMFDLWPTLSLGRPVHLLNHANNIMPRNNIRHLTRVDVASPASWASTPSLL 243
H S AFD ++++W L G + ++ + P + L A+ TPS
Sbjct: 3978 FH-SFAFDFSVWEIWGALLHGGRLLIVPQLVSRSPEDFYNLLCN---AAVTVLNQTPSAF 4033
Query: 244 QLMCTDPQFTAENLPDLRFFVVGGEMLPGALVQELQTRFPQA--QVLNGYGPSEATCATH 301
+ + T Q + LR + GGE L A+++ R A Q++N YG +E T
Sbjct: 4034 RQLIT-AQGENQQAHSLRQVIFGGEALETAMLKPWYARNVNAGTQLVNMYGITETTVHVT 4092
Query: 302 LYPISVADAAADGPMKIGCAVGENRMQIIDADGEDVPAGEEGELVLSGPQVISHYLPQDH 361
YP+ DA G IG + + ++ ++D GE VP G GEL + G V YL ++
Sbjct: 4093 YYPLQPEDALRVGASPIGTRIPDLQLYLLDTCGEPVPVGVVGELYVGGAGVARGYLNREA 4152
Query: 362 PA-----NAALSQESGINTYRTGDLARLDVDGNLILLGRIDRQVKLLGNRIELNEIERIA 416
+ S G YRTGDL R DG L LGR D QVK+ G RIEL EIE
Sbjct: 4153 LTAERFIDNPFSTVPGTRLYRTGDLGRWLADGTLEYLGRNDEQVKIRGFRIELGEIEARL 4212
Query: 417 EGYSAVRKAVCLPQKDAAG--RVTGLQLFVEPLAGATCERDGLFAHMGKHLSAQVLPRDL 474
Y VR AV L ++D G R+ + P + + + L H+ + L ++P
Sbjct: 4213 AEYPDVRDAVVLCREDVPGDKRLVAYVTTLHP--ESLLDIETLREHLQETLPQYMVPAAY 4270
Query: 475 RIVSAFPVTSNGKLDTRIL 493
++A P+T+NGKLD + L
Sbjct: 4271 VQLNALPLTANGKLDRKAL 4289
Score = 146 bits (368), Expect = 2e-38
Identities = 138/492 (28%), Positives = 214/492 (43%), Gaps = 42/492 (8%)
Query: 21 ALITSEEVISFGSL---AGRVEGILRALDDMPPGLSLIVGHKEPDCIAAMIACAIAGRAF 77
A++ E+ +++ L A R+ LR P I + + ++A AG +
Sbjct: 4894 AVVHGEQRLTYRELNEQANRLANALRKQGVQPDSRVGICVERGAQMVVGLLAILKAGGGY 4953
Query: 78 AFADRSTPMDRLEQIAS-TAGASHILAFGQETLPGGLPVQTL--------KELPTRTPQL 128
D + P +R+ I +A A+ ++ L G+ VQ + ++ P + P +
Sbjct: 4954 VPLDPAYPAERISYILQDSAPAAVLVQAATRHLLAGVSVQAIDLDDQSAWQDEPVQNPDV 5013
Query: 129 ELKTALSEEGTFYVIFTSGSTGTPKGVPISRGNYMALHRWYTPLLGAVRPEGAHVNHASM 188
E L+ Y+I+TSGSTG PKGV I N + W E + S+
Sbjct: 5014 E---GLNSAHLAYLIYTSGSTGLPKGVMIEHRNTVNFLTWAHHAFNGSALERTLFS-TSL 5069
Query: 189 AFDMGMFDLWPTLSLGRPVHLLNHANNIMPRNNIRHLTRVDVASPASWASTPSLLQLMCT 248
FD+ +++ + L+ G ++++ N++ + H D+ + PS L+ +
Sbjct: 5070 NFDLAVYECFAPLTSGGSINVVK---NVLELQHGEH----DIGLVNT---VPSALKAL-- 5117
Query: 249 DPQFTAENLPDLRFFV-VGGEMLPGALVQELQTRFPQAQVLNGYGPSEATCATHLYPISV 307
+ LP+ V V GE L +LV+ L + ++ N YGPSE T Y V
Sbjct: 5118 ---LEIDGLPESVHTVNVAGEALKRSLVENLFEKTGVQRLCNLYGPSETTT----YSSWV 5170
Query: 308 ADAAADG-PMKIGCAVGENRMQIIDADGEDVPAGEEGELVLSGPQVISHYLPQDHPA--- 363
A DG IG VG R ++D + VP G GE+ + G V YL +D
Sbjct: 5171 AMDREDGFAAHIGRPVGNTRFYLLDEQQQLVPRGVPGEIYIGGAGVARGYLNRDDLTAER 5230
Query: 364 --NAALSQESGINTYRTGDLARLDVDGNLILLGRIDRQVKLLGNRIELNEIERIAEGYSA 421
S G YRTGDL R DGN+ LGR D QVK+ G RIEL EI+ + A
Sbjct: 5231 FLTDPFSLTPGARMYRTGDLGRYLPDGNIEYLGRNDDQVKIRGFRIELGEIDACLAKHPA 5290
Query: 422 VRKAVCLPQKDAAGRVTGLQLFVEPLAGATCERDGLFAHMGKHLSAQVLPRDLRIVSAFP 481
V +AV + ++D G + + F + L H+ L +LP + A P
Sbjct: 5291 VHEAVVMAREDVPGEIRLVAYFTPTDPAVITDSGSLRTHLQGLLPDYMLPAAYMPLDALP 5350
Query: 482 VTSNGKLDTRIL 493
+T NGKLD L
Sbjct: 5351 LTPNGKLDRNAL 5362
Score = 140 bits (354), Expect = 9e-37
Identities = 134/493 (27%), Positives = 216/493 (43%), Gaps = 45/493 (9%)
Query: 21 ALITSEEVISFGSL---AGRVEGILRALDDMPPGLSLIVGHKEPDCIAAMIACAIAGRAF 77
A++ E +++ L A R+ LR P I + + + ++A AG +
Sbjct: 1660 AVVHGERRLTYRELNEQANRLAHALRKQGVEPDSRVGICVERGAEMVVGLLAILKAGGGY 1719
Query: 78 AFADRSTPMDRLEQIASTAGASHILAFGQETLPGGL------PVQTL-----KELPTRTP 126
D + P++R+ + + + +LA +T GL PV L ++ + P
Sbjct: 1720 VPLDPAYPIERIAYMLQDSAPAAVLA---QTATQGLLADVSVPVINLDLSDWQDGSVQNP 1776
Query: 127 QLELKTALSEEGTFYVIFTSGSTGTPKGVPISRGNYMALHRWYTPLLGAVRPEGAHVNHA 186
Q+ L+ Y+I+TSGSTG PKGV I N + W A E +
Sbjct: 1777 QV---AGLTSAHLAYLIYTSGSTGLPKGVMIEHRNTVNFLTWAHTAFDASALEKTLFS-T 1832
Query: 187 SMAFDMGMFDLWPTLSLGRPVHLLNHANNIMPRNNIRHLTRVDVASPASWASTPSLLQLM 246
S+ FD+ +++ + L+ G + ++ N++ + H D+ + PS L+ +
Sbjct: 1833 SLNFDLAVYECFAPLTSGGSIKVVK---NVLELQHGEH----DIGLINT---VPSALKAL 1882
Query: 247 CTDPQFTAENLPDLRFFV-VGGEMLPGALVQELQTRFPQAQVLNGYGPSEATCATHLYPI 305
+ LP V V GE L +LV+ L ++ N YGPSE T + +
Sbjct: 1883 -----LEVDGLPTSVHTVNVAGEALKRSLVESLFENTGVQRLCNLYGPSETTTYSSWVAM 1937
Query: 306 SVADAAADGPMKIGCAVGENRMQIIDADGEDVPAGEEGELVLSGPQVISHYLPQDHPANA 365
D A IG VG + ++D + VP G GE+ + G V YL +D
Sbjct: 1938 DREDGFAP---HIGKPVGNTQFYLLDEQQQLVPLGVAGEIYIGGAGVARGYLNRDDLTAE 1994
Query: 366 AL-----SQESGINTYRTGDLARLDVDGNLILLGRIDRQVKLLGNRIELNEIERIAEGYS 420
SQ+ YRTGDL R DGN+ LGR D QVK+ G RIEL EI+ +
Sbjct: 1995 RFLADPFSQQPAARMYRTGDLGRYSADGNIEYLGRNDDQVKIRGFRIELGEIDARLAKHP 2054
Query: 421 AVRKAVCLPQKDAAGRVTGLQLFVEPLAGATCERDGLFAHMGKHLSAQVLPRDLRIVSAF 480
AV +AV ++D G + + + + D L +H+ + L ++P ++ A
Sbjct: 2055 AVHEAVVTAREDVPGDKRLVAYYTLAVGHTALDGDSLRSHLQEKLPEYMVPAIYVLLEAM 2114
Query: 481 PVTSNGKLDTRIL 493
P+T NGKLD + L
Sbjct: 2115 PLTPNGKLDRKAL 2127
Score = 129 bits (325), Expect = 2e-33
Identities = 134/495 (27%), Positives = 214/495 (43%), Gaps = 35/495 (7%)
Query: 21 ALITSEEVISFGSL---AGRVEGILRALDDMPPGLSLIVGHKEPDCIAAMIACAIAGRAF 77
A++ E+ +++ L A R+ L P I + + + ++A AG +
Sbjct: 581 AVVYGEQRLTYHELNQQANRLAHALLKQGVQPDSRVGICVERGAEMVVGLLAILKAGGGY 640
Query: 78 AFADRSTPMDRLEQIASTAGASHILA--FGQETLPG-GLPVQTLKELPTRTPQLELK--T 132
D + P++R+ + + + +LA Q L PV L + + ++
Sbjct: 641 VPLDPAYPVERIAYMLQDSAPAAVLAQTATQRLLADVSAPVINLDQCNWQDESVQNPKVA 700
Query: 133 ALSEEGTFYVIFTSGSTGTPKGVPISRGNYMALHRW-YTPLLGAVRPEGAHVNHASMAFD 191
L Y+I+TSGSTG PKGV I N + W + G+V + S+ FD
Sbjct: 701 GLISAHLAYLIYTSGSTGLPKGVMIEHRNTVNFLTWAHNAFEGSVLEKTLF--STSLNFD 758
Query: 192 MGMFDLWPTLSLGRPVHLLNHANNIMPRNNIRHLTRVDVASPASWASTPSLLQLMCTDPQ 251
+ +++ + L+ G + ++ N++ + H D+ + PS L+ +
Sbjct: 759 LAVYECFAPLTSGGSIKVVR---NVLELQHGEH----DIGLINT---VPSALKAL----- 803
Query: 252 FTAENLPDLRFFV-VGGEMLPGALVQELQTRFPQAQVLNGYGPSEATCATHLYPISVADA 310
LPD V V GE L LV+ L + ++ N YGPSE T + + D
Sbjct: 804 LDVNGLPDSVHTVNVAGEALKRNLVENLFEKTGVQRLCNLYGPSETTTYSSWVAMDREDG 863
Query: 311 AADGPMKIGCAVGENRMQIIDADGEDVPAGEEGELVLSGPQVISHYLPQDHPA-----NA 365
A IG VG + ++D + VP G GE+ + G V YL +D
Sbjct: 864 FAP---HIGKPVGNTQFYLLDEQRQPVPLGVAGEIYIGGAGVARGYLNRDDLTAERFLTD 920
Query: 366 ALSQESGINTYRTGDLARLDVDGNLILLGRIDRQVKLLGNRIELNEIERIAEGYSAVRKA 425
SQ+ YRTGDL R DGN+ LGR D QVK+ G RIEL EI+ + AV +A
Sbjct: 921 PFSQQPAARMYRTGDLGRYLPDGNIEYLGRNDDQVKIRGFRIELGEIDARLTKHPAVHEA 980
Query: 426 VCLPQKDAAGRVTGLQLFVEPLAGATCERDGLFAHMGKHLSAQVLPRDLRIVSAFPVTSN 485
V ++D G + + A+ + D L + + L A ++P + A P+T N
Sbjct: 981 VVTAREDIPGDKRLVAYYTLIPRQASVDIDNLRGWLQEQLPAYMIPVAYVRLDAMPLTPN 1040
Query: 486 GKLDTRILLEGGSDL 500
GKL + L SDL
Sbjct: 1041 GKLHRQALPAPESDL 1055