Pairwise Alignments

Query, 978 a.a., ribonuclease E from Phaeobacter inhibens DSM 17395

Subject, 1057 a.a., ribonuclease E from Azospirillum brasilense Sp245

 Score =  763 bits (1969), Expect = 0.0
 Identities = 497/1067 (46%), Positives = 619/1067 (58%), Gaps = 183/1067 (17%)

Query: 1   MAKKMLIDATHAEETRVVVVDGNKVEEFDFESENKRQLAGNIYLAKVTRVEPSLQAAFVD 60
           MAK+ML+DATH EETRV VV+GN++E+ DFE   ++QL GNIYLAKVTRVEPSLQAAFV+
Sbjct: 1   MAKRMLVDATHPEETRVAVVNGNRLEDLDFEIATRKQLKGNIYLAKVTRVEPSLQAAFVE 60

Query: 61  YGGNRHGFLAFSEIHPDYYQIPVADREALMEEERAYAEAQRARDDEEDAKPARRQSRSRR 120
           YGGNRHGFLAFSEIHPDYY+IP+ADREAL+ EER   E   AR +            +  
Sbjct: 61  YGGNRHGFLAFSEIHPDYYRIPIADREALLAEERRLEEQAEARAE-----------AAAD 109

Query: 121 GRTKAADVKSADVVETKDVSPETAENGADIAGMETIDLTDEVAVAETKLADVPEAAQTEA 180
           G   A  ++   VVE     P                                  +  EA
Sbjct: 110 GAVMAEPIRPDVVVEENSPMP---------------------------------GSYAEA 136

Query: 181 AADDATAAEPVVEEAVKDASDTPEAQDASSESGEAEGAADTATTEADDAADDADADDSAD 240
             D      P              A DA S+ G            +D+AAD  +A + A 
Sbjct: 137 EGDGFEGDIPAF------------ATDAGSDGG------------SDEAADSDEAPEGAA 172

Query: 241 KDAAADATAKDENIESVADEDDSEDIRPVRKPRPRRYKIQEVIKVRQVLLVQVVKEERGN 300
              + D    DE      +E      RP+R      YKIQEVIK RQV+LVQV KEERGN
Sbjct: 173 PAESPDVIGGDE-----VEEAHRRRARPLRS-----YKIQEVIKRRQVMLVQVTKEERGN 222

Query: 301 KGAALTTYLSLAGRYCVLMPNTARGGGISRKITNAADRKKLKDIAVELDVPTGAGLIVRT 360
           KGAALTTYLSL GRYCVLMPNT RGGGISRKITN ADRK+LK+I  +LD+P G  +I+RT
Sbjct: 223 KGAALTTYLSLPGRYCVLMPNTGRGGGISRKITNPADRKRLKEILSDLDIPEGMAVILRT 282

Query: 361 AGAKRTKSEIKRDYEYLQRLWEQIRELTLKSIAPAKIYEEGDLIKRSIRDLYSREIDEVL 420
           AG +R+K EIKRD EYL RLW+ IR  TLKS AP  IYEE +LIKRSIRDLY+ +IDE+ 
Sbjct: 283 AGLERSKQEIKRDLEYLLRLWDDIRVQTLKSSAPCLIYEEANLIKRSIRDLYTDDIDEIW 342

Query: 421 VEGERGYRIAKDFMKMIMPSHAKNVKNYQDQ-LPLFARFQVESYLGAMFNPTVQLKSGGY 479
           VEG  G+  A+DFM+M+MPSH+K V  YQD  +PLF R+QVE+ + A+ +P VQL+SGGY
Sbjct: 343 VEGSAGFNTARDFMRMMMPSHSKRVMQYQDDTIPLFHRYQVETQIDAIHSPVVQLRSGGY 402

Query: 480 IVIGVTEALVAIDVNSGRATKEGSIEETALKTNLEAAEEVARQLRLRDLAGLIVIDFIDM 539
           IVI  TEALV+IDVNSG++T+E +IEETA KTNLEAA+EVARQLRLRDLAGLIVIDFIDM
Sbjct: 403 IVINPTEALVSIDVNSGKSTRERNIEETAYKTNLEAADEVARQLRLRDLAGLIVIDFIDM 462

Query: 540 DERKNNAAVEKRMKDKLKTDRARIQVGRISGFGLMEMSRQRLRPGMIEATTAPCPHCHGT 599
           +E +NNAAVE+R+K+ +K DRARIQ+GRIS FGL+E+SRQRLRP ++E     CPHC GT
Sbjct: 463 EEPRNNAAVERRLKEAMKNDRARIQLGRISAFGLLELSRQRLRPSLLETNFERCPHCSGT 522

Query: 600 GLIRSDDSLALSILRQIEEEGTRRRSREVLVRCPVSIANYLMNQKREHIAQIETRYGLSV 659
           G+IRS +S +L +LR IEEEG R+RS E+ V  P  IA Y++NQKR  + +IE RY   V
Sbjct: 523 GVIRSVESASLHVLRAIEEEGIRKRSSEITVFVPTRIALYILNQKRGELTKIEDRYRFRV 582

Query: 660 RIEGDPHLVSPDFSLEKFK--TASRVVPVATAPVVSVDTSIMDQVDADEASDEADEAE-V 716
            ++ D  L++PD  LE+ K  T    VP+ +A  V  +T  +   +A+EA +EA   E  
Sbjct: 583 MVQADDTLIAPDLRLERVKARTPEDDVPLVSAERVLAETDRILAAEAEEAEEEAPVVEAA 642

Query: 717 EANDTDVAEVQAAGDEGEGDNKPKRKRRRRRRRKSSGADGDD-----------SNNTAQG 765
           E    +V E   A  E EGD     +RRRRRRR+  G D +D           S+   +G
Sbjct: 643 EVAGAEVTERADAAGESEGD-----RRRRRRRRRGRGRDREDGRAPFGESAEASDEATEG 697

Query: 766 D------ANAD---DQKASDDAAA---------------------------DDAD-AQAE 788
           D      A+AD   D+ A D+ A                            +DAD A +E
Sbjct: 698 DEIEAEAADADTDADETAVDEEAIERAQIDAPEFVINDVDVGPAHIEDDEDEDADLAASE 757

Query: 789 PAEGSDAKEAEGD--GEVKKRTR----TRTRSRSRK----------KRTDETVAAEAEA- 831
             +G+DA E  GD  GE KKR R     R RSR R+            +++ V  EAEA 
Sbjct: 758 ADDGTDAFETNGDANGERKKRRRGKRGGRRRSRQREGLEAGEGLPAAESEDGVEGEAEAE 817

Query: 832 -------------PAETDAKAEP-EGQAIVTEAKAEDSNAAESEAPVASAEAPVEGAEEP 877
                        P E  A  EP E   ++T A AED NAA++ AP  +AE P   AEE 
Sbjct: 818 SFPTAVEAGRAVNPPELPADMEPVEFDWVLTSAVAED-NAADA-APDTAAEGPT--AEEA 873

Query: 878 AVLNGDAAAEVP--------AAAEAETAAATEEAAPA--QIVADEATAEDVVADQDTPAA 927
           A +  +A A  P        AA  AE+  A  EAAPA  +  A  A        +   A 
Sbjct: 874 APVAEEAPARKPRRGRAKATAAEAAESVTAEPEAAPAKPKRAAKGAAKGGKATAKAAAAP 933

Query: 928 EASAPAAAEP-QAADAPTEEPEAAPEPA--LATAEAEPASPPKPKRR 971
           E +AP  A+P ++  A T   EAAP PA   A    EP   P  KR+
Sbjct: 934 EETAPPPAKPSRSRKAKTAAVEAAPAPAPVAAPVAEEPKKRPARKRK 980