Pairwise Alignments

Query, 589 a.a., C4-dicarboxylate transport sensor protein DctB from Phaeobacter inhibens DSM 17395

Subject, 607 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  184 bits (466), Expect = 1e-50
 Identities = 145/574 (25%), Positives = 279/574 (48%), Gaps = 55/574 (9%)

Query: 51  ESTRNRAELRLALYSGNLVSELGRHAIVPQLLARDQALISALQSNDFSLSTQRLISFVEE 110
           E TR ++  ++      L   L R+  +P +L+ +  L SAL   D   +   L  ++EE
Sbjct: 41  EMTRQQSNAQMKELLSFLSGSLSRYESIPHVLSTNPLLASALLKQDDPDTITPLNRYLEE 100

Query: 111 IG----AASIMLMAQDGRTVAATDRNR----LGETHRNAAYFVDALRSKTTVFSAIRTEV 162
           I     A  I L+  DG  +AA++  +    +G+ +    YF DA+  K   + A+ T  
Sbjct: 101 IQSITEALDIYLVNIDGDAIAASNWQQSYSFIGKNYAFRPYFKDAIEGKMGRYFAVGTSS 160

Query: 163 GS--YRFTY-----SRRIVDTSG---ILGVIVVEVDLQKFERAWAGISDA----VMVSDS 208
               Y F+Y        +  + G   +LG IVV+VD+ + E+   G++        +SD 
Sbjct: 161 NKRGYYFSYPIYSHGYPVTPSQGEAKVLGAIVVKVDVTEIEQQSTGMARGSNYEFAISDP 220

Query: 209 TGTILLATESRWR--GLSEEDALQLQTPEGAIQRAIRATTDWT-------ALPADAYL-- 257
              I L++   WR   L+       Q  E + + A R  +          +L AD  +  
Sbjct: 221 DHIIFLSSRPEWRLTALTPVTHQLKQRIESSRRYANREISPLAIEPPFAPSLAADYQIYQ 280

Query: 258 -----QGEAVMRLESRIPFQGWRLTSFTTYASIRERVNTVLALEIMGFAILLALAFYALS 312
                +G   M   + +   GW++   +    I   +  +L L    + +      +A+ 
Sbjct: 281 IGDDKRGAEFMDNAAYMSDAGWQVHILSPMTPIYRSLPPLLLLYGALYLLCALALLFAIE 340

Query: 313 RRTALRMALFQRESAELRVLNARLQREIAERERMQET----LAVAEQSLAQSSKLAALGE 368
           +R         + +  ++  + +L++ + ER +  ET    L  A+  L Q++KL  +G 
Sbjct: 341 KR---------KNTRRMQQAHEQLEQRVKERTQALETSHQQLKEAQDELIQAAKLTVIGS 391

Query: 369 MSAAVSHELNQPLAAMKTYLAGARLLLNRNRPEEALASFGRIDDLIERMGAITRQLKSYA 428
           +SA+++HE+NQPLAA+++Y    + LL+R + ++  ++   I +L +R+ AI  Q KS+ 
Sbjct: 392 LSASINHEINQPLAAIRSYAQNTQTLLSRAKWDDVSSNIMTIIELTDRLAAIVSQFKSFT 451

Query: 429 RKGGDAFSPVNMGDALASSLSMMEPQLRQRHVKIARILPEQPVYVMGDRMRIEQVMVNLL 488
           RK       +++   +  +L++++P++ ++ + +     E    + GD +R++QV++NL+
Sbjct: 452 RKSQGNDKAISVAQCIRDALTIVQPEVDKQGIDLVLNNTECQTLLWGDPIRLQQVLINLM 511

Query: 489 RNALDATKSVADPEVEILLAAGETATLSVRDNGMGIKD--FGSLFEPFYTTKQPGDGVGL 546
            NA+ A ++    ++ I +       +++ D G GI +     +F+P+YT+ +   G+GL
Sbjct: 512 SNAMVAMRANNPKQLIIGVVVSNRLEITIEDTGTGIDESQMQKIFDPYYTSSR--QGLGL 569

Query: 547 GLAISSGIVNDLGGRLTARNGQNGGAVFEMQLPI 580
           GL+IS  IV  + G+++  N Q GGA+F++ LPI
Sbjct: 570 GLSISRRIVEAMQGKISVANRQQGGAIFQITLPI 603