Pairwise Alignments

Query, 343 a.a., putative transcriptional regulator, lacI family from Phaeobacter inhibens DSM 17395

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  120 bits (301), Expect = 5e-32
 Identities = 106/340 (31%), Positives = 158/340 (46%), Gaps = 19/340 (5%)

Query: 9   MDEFASVSGISRPTLSKFFNDPDSVRKSTRERIEEALEKFDYRPNLYAMNQNRRLTKTIG 68
           M + A ++G+S  T+S+   +P+ V  STR+R+EEA+ +  Y PN  A N  R  +KTI 
Sbjct: 4   MKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIV 63

Query: 69  IVVPNLTDPFFAKISRHIEDHVIAAGYRPVLLGSNGTPAQELENLNNLRLLKPAGTLLAP 128
            +VP++ DP+F++I R IED  +  GY  VLLG +G   +   +  NL   K A  +L  
Sbjct: 64  AIVPDICDPYFSEIIRGIEDAAMEHGYL-VLLGDSGQQKRRENSFVNLVFTKQADGMLLL 122

Query: 129 LGRVSETPQIREFCNEVPTVLFDANLENTGEAFIGSDNQQSVTTIVEYLCRTGDAPAFFE 188
              +       E  N  P V+            +  DN  S    V YL + G      +
Sbjct: 123 GTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGH-KRIAQ 181

Query: 189 MKTPTNPNAVK-RRNAYISSMERLGHRPELIQVDGDGWDFEEIGFREG---TRLLSGQRS 244
           +  P +    + R   Y  ++ R G     I ++     F +  F  G    R L     
Sbjct: 182 ISGPQHAALCQFRHQGYQQALRRAG-----ITMNPTYCTFGDFTFEAGAKAVRQLLALPE 236

Query: 245 ATNTILCSNDRLAIGLLSAAYQLGLRVGLGDGCALRVAGHDDHPFSRYTCPTLTTVSQDY 304
               I C ND +AIG +  A +LGLRV       L V G DD  F++Y  P LTT+SQ  
Sbjct: 237 QPTAIFCHNDTMAIGAIQEAKRLGLRVPQD----LSVVGFDDIQFAQYCDPPLTTISQPR 292

Query: 305 TAIARTSAETLVARIEGNAL-ADSRQDILFDGQLVMRGSA 343
             I R +   ++  + G+ + A SR   L + +LV+R SA
Sbjct: 293 YEIGRQAMLMMLELLRGHDVRAGSR---LLETKLVVRESA 329